Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- extracellular 1
- cytosol 2
- plasma membrane 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr2P10980_001 | Banana | nucleus | 69.97 | 53.68 |
| GSMUA_Achr1P02030_001 | Banana | nucleus | 80.5 | 53.06 |
| GSMUA_Achr11P... | Banana | nucleus | 67.8 | 44.6 |
| CDY09386 | Canola | nucleus | 53.56 | 43.14 |
| Bra026612.1-P | Field mustard | nucleus | 55.42 | 43.13 |
| CDY15819 | Canola | nucleus | 56.35 | 41.18 |
| GSMUA_Achr5P19220_001 | Banana | nucleus | 53.87 | 41.13 |
| CDY17607 | Canola | nucleus | 55.11 | 40.09 |
| VIT_01s0010g01760.t01 | Wine grape | nucleus | 63.16 | 40.0 |
| Bra024828.1-P | Field mustard | nucleus | 55.42 | 39.78 |
| Os02t0116800-01 | Rice | nucleus | 61.3 | 38.82 |
| CDY03066 | Canola | nucleus | 47.99 | 38.46 |
| TraesCS6A01G046400.1 | Wheat | nucleus | 60.37 | 38.39 |
| TraesCS6B01G062500.1 | Wheat | nucleus | 60.37 | 38.39 |
| TraesCS6D01G053500.1 | Wheat | nucleus | 60.06 | 38.11 |
| AT2G02170.2 | Thale cress | nucleus | 56.66 | 37.65 |
| KRH42459 | Soybean | nucleus | 59.44 | 37.65 |
| HORVU0Hr1G040310.2 | Barley | cytosol, mitochondrion, nucleus | 59.75 | 37.55 |
| Os03t0120200-01 | Rice | nucleus | 48.92 | 37.35 |
| KRH58560 | Soybean | nucleus | 58.51 | 37.28 |
| Solyc01g008180.2.1 | Tomato | nucleus | 58.82 | 36.4 |
| Zm00001d027403_P001 | Maize | nucleus | 46.44 | 35.38 |
| KXG40319 | Sorghum | nucleus | 46.44 | 35.38 |
| Zm00001d054034_P001 | Maize | nucleus | 60.06 | 35.21 |
| Zm00001d048481_P001 | Maize | cytosol, mitochondrion, nucleus | 45.2 | 34.68 |
| EES06158 | Sorghum | nucleus, plastid | 60.68 | 34.39 |
| TraesCS4D01G343800.1 | Wheat | nucleus | 44.58 | 34.12 |
| TraesCS5A01G517700.1 | Wheat | nucleus | 44.27 | 33.89 |
| TraesCS4B01G349100.1 | Wheat | nucleus | 44.27 | 33.73 |
| GSMUA_Achr9P07790_001 | Banana | nucleus | 32.2 | 33.12 |
| GSMUA_Achr3P17060_001 | Banana | nucleus | 34.37 | 32.17 |
| HORVU4Hr1G085140.6 | Barley | nucleus, plastid | 43.96 | 29.4 |
| GSMUA_Achr6P00160_001 | Banana | nucleus | 20.74 | 24.72 |
| GSMUA_Achr10P... | Banana | nucleus | 40.87 | 24.35 |
| GSMUA_Achr2P13770_001 | Banana | cytosol, nucleus, plastid | 20.12 | 23.21 |
| GSMUA_Achr4P33120_001 | Banana | nucleus | 19.2 | 22.79 |
| GSMUA_Achr5P26590_001 | Banana | nucleus | 35.29 | 22.4 |
| GSMUA_Achr10P... | Banana | nucleus | 25.39 | 18.22 |
| GSMUA_Achr2P07310_001 | Banana | nucleus | 24.15 | 15.66 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr5P11780_001 | EnsemblPlants:GSMUA_Achr5T11780_001 | EnsemblPlantsGene:GSMUA_Achr5G11780_001 | InterPro:Remorin_C | ncoils:Coil | PANTHER:PTHR31471 |
| PANTHER:PTHR31471:SF17 | PFAM:PF03763 | SEG:seg | UniParc:UPI0002951F24 | UniProt:M0SXQ7 | MapMan:35.2 |
Description
remorin family protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr5G11780_001]
Coordinates
chr5:-:8478047..8482641
Molecular Weight (calculated)
35825.2 Da
IEP (calculated)
8.599
GRAVY (calculated)
-0.700
Length
323 amino acids
Sequence
(BLAST)
(BLAST)
001: MNRHAAAKVV LDVEEVDTKR VDGCQASKKV GEIKSVNWLA EPCPVPDSGM KLGVAVENSV VDSAVNLSWH DSSTSLQSAT SFMMPAPTVR SVSMRDMGTE
101: MTPIASQEPS RTGTPVGATS PICSPTSSRP PTPQRTAPVS TQTDSADCHE DFNKKKSSEK ELQRETRREI LVLGQQLGKT NITAWASKDE EINASNSTKN
201: VSKDQPAISV VEARATAWEE AEKAKYLARF RREEIKIQAW ENHQKATIEA EMRKIEVEVE RMRASAHEKL MNQLSAVRHK AEEKRATAEA KRNQQAARIA
301: QQADYIRRTG RIPSSFSCWS WCS
101: MTPIASQEPS RTGTPVGATS PICSPTSSRP PTPQRTAPVS TQTDSADCHE DFNKKKSSEK ELQRETRREI LVLGQQLGKT NITAWASKDE EINASNSTKN
201: VSKDQPAISV VEARATAWEE AEKAKYLARF RREEIKIQAW ENHQKATIEA EMRKIEVEVE RMRASAHEKL MNQLSAVRHK AEEKRATAEA KRNQQAARIA
301: QQADYIRRTG RIPSSFSCWS WCS
001: MDYERIGKTQ VTSSGGGFSP GKLRSMLLLG VDRKKNEEEE STPTMRSGSN QIDDPRVYVA SGLDDCKDVD VVSEITDCST SGIARSISLG LQEYSDYDNV
101: NEIKSVSASS VFEFQKTEKE KVNQRMPIRS FSKPAPSKWD DAQKWIASPT ANRPKTGQVQ VPGSKKGPSF GRQSSMKIVE VAEHRVVEEP DTKRIDVSQV
201: KKDMGNKFGS WEVDSYTTVD SYVKPVLMVE NSIVESATEV NLSRHDSSVA TAFAQPPSTA RSVSMRDMGT EMTPIASQEP SRNGTPIRAT TPIRSPISSE
301: PSSPGRQASA SPMSNKELSE KELQMKTRRE IMVLGTQLGK FNIAAWASKE DEDKDASTSL KTKASLQTSK SVSEARATAW EEAEKAKHMA RFRREEMKIQ
401: AWENHQKAKS EAEMKKTEVK VERIKGRAQD RLMKKLATIE RKAEEKRAAA EAKKDHQAAK TEKQAEQIRR TGKVPSLLFS CFSFCS
101: NEIKSVSASS VFEFQKTEKE KVNQRMPIRS FSKPAPSKWD DAQKWIASPT ANRPKTGQVQ VPGSKKGPSF GRQSSMKIVE VAEHRVVEEP DTKRIDVSQV
201: KKDMGNKFGS WEVDSYTTVD SYVKPVLMVE NSIVESATEV NLSRHDSSVA TAFAQPPSTA RSVSMRDMGT EMTPIASQEP SRNGTPIRAT TPIRSPISSE
301: PSSPGRQASA SPMSNKELSE KELQMKTRRE IMVLGTQLGK FNIAAWASKE DEDKDASTSL KTKASLQTSK SVSEARATAW EEAEKAKHMA RFRREEMKIQ
401: AWENHQKAKS EAEMKKTEVK VERIKGRAQD RLMKKLATIE RKAEEKRAAA EAKKDHQAAK TEKQAEQIRR TGKVPSLLFS CFSFCS
Arabidopsis Description
At2g02170/F5O4.6 [Source:UniProtKB/TrEMBL;Acc:Q9ZUM1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.