Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES06158 | Sorghum | nucleus, plastid | 82.76 | 80.0 |
| Os02t0116800-01 | Rice | nucleus | 73.32 | 79.22 |
| TraesCS6D01G053500.1 | Wheat | nucleus | 70.24 | 76.03 |
| TraesCS6A01G046400.1 | Wheat | nucleus | 70.05 | 75.98 |
| TraesCS6B01G062500.1 | Wheat | nucleus | 69.87 | 75.79 |
| HORVU0Hr1G040310.2 | Barley | cytosol, mitochondrion, nucleus | 69.51 | 74.51 |
| GSMUA_Achr5P11780_001 | Banana | cytosol | 35.21 | 60.06 |
| CDY09386 | Canola | nucleus | 41.74 | 57.36 |
| VIT_01s0010g01760.t01 | Wine grape | nucleus | 52.45 | 56.67 |
| GSMUA_Achr1P02030_001 | Banana | nucleus | 49.55 | 55.71 |
| Bra026612.1-P | Field mustard | nucleus | 41.74 | 55.42 |
| GSMUA_Achr11P... | Banana | nucleus | 49.0 | 54.99 |
| CDY15819 | Canola | nucleus | 43.92 | 54.75 |
| GSMUA_Achr2P10980_001 | Banana | nucleus | 41.02 | 53.68 |
| CDY17607 | Canola | nucleus | 43.01 | 53.38 |
| KRH42459 | Soybean | nucleus | 49.0 | 52.94 |
| KRH58560 | Soybean | nucleus | 48.46 | 52.66 |
| Bra024828.1-P | Field mustard | nucleus | 42.65 | 52.22 |
| CDY03066 | Canola | nucleus | 38.11 | 52.11 |
| AT2G02170.2 | Thale cress | nucleus | 44.46 | 50.41 |
| Solyc01g008180.2.1 | Tomato | nucleus | 47.73 | 50.38 |
| Zm00001d048481_P001 | Maize | cytosol, mitochondrion, nucleus | 37.39 | 48.93 |
| Zm00001d027403_P001 | Maize | nucleus | 37.57 | 48.82 |
| GSMUA_Achr5P19220_001 | Banana | nucleus | 34.48 | 44.92 |
| Zm00001d041496_P001 | Maize | nucleus | 26.13 | 37.8 |
| Zm00001d050790_P003 | Maize | nucleus | 20.87 | 33.92 |
| Zm00001d051005_P001 | Maize | mitochondrion, nucleus | 17.97 | 31.83 |
| Zm00001d002274_P001 | Maize | nucleus, plastid | 30.49 | 29.73 |
| Zm00001d006626_P001 | Maize | nucleus | 13.43 | 28.35 |
| Zm00001d034558_P001 | Maize | nucleus | 12.7 | 26.92 |
| Zm00001d021839_P001 | Maize | nucleus | 13.43 | 25.17 |
| Zm00001d048829_P001 | Maize | plastid | 15.79 | 18.91 |
Protein Annotations
| EnsemblPlants:Zm00001d054034_P001 | EnsemblPlants:Zm00001d054034_T001 | EnsemblPlantsGene:Zm00001d054034 | EntrezGene:100193979 | InterPro:Remorin_C | ncoils:Coil |
| PANTHER:PTHR31471 | PANTHER:PTHR31471:SF1 | PFAM:PF03763 | ProteinID:AQK61086.1 | SEG:seg | UniParc:UPI0008439998 |
| UniProt:A0A1D6QUN6 | MapMan:35.2 | : | : | : | : |
Description
Remorin family protein
Coordinates
chr4:-:245348907..245352015
Molecular Weight (calculated)
59302.5 Da
IEP (calculated)
8.214
GRAVY (calculated)
-0.700
Length
551 amino acids
Sequence
(BLAST)
(BLAST)
001: MEYERIEKPF PVQQGGGFSP KRLRAMLLGV DKRRKGQDGA AEEDEDGGGD YGALPKAHAR SGAGDGGGGG GATCEEYKDV DVVSTTSEFS SSLETAGGHR
101: PRDAHPVATG SRTRVPPEED SCDSESVASN FEFHKERRAA ASAAASVVPP FSKPAPSKWD DAQKWIASPT ANCPGRGGAA PAPKKTEKPG SGIGRLPLPA
201: TKVVVEATEE IDTKRMDPSQ EKREIGWQKA ARWAPPDPCP EAEPCPTKTT LLAVETTVAA ASAAGKGCAV LTSPSPHDMI LLSSSNWKKV ALDAVNFNRH
301: DASTTLQSAA TCIPPPTTVR SVSMRDMGTE MTPIASQEPS RTGTPVRATS PNCSQPTTPR RTLGGPSAVG SFISHGGECS SSELSEQELQ TKTRREIMLL
401: GTQLGKTSIA AWASKKEEEK DASLSLKPVP MDQSTQNITA IRAAAWEEAE KAKYLARFKR EEIKIQAWED HQKAQIEAEM RKIEVEVERM RARAQDKLMT
501: KLASARHSAD EKRATAELKR NRAAARTAEQ AEHIRRTGRV PPSFGCWNWC S
101: PRDAHPVATG SRTRVPPEED SCDSESVASN FEFHKERRAA ASAAASVVPP FSKPAPSKWD DAQKWIASPT ANCPGRGGAA PAPKKTEKPG SGIGRLPLPA
201: TKVVVEATEE IDTKRMDPSQ EKREIGWQKA ARWAPPDPCP EAEPCPTKTT LLAVETTVAA ASAAGKGCAV LTSPSPHDMI LLSSSNWKKV ALDAVNFNRH
301: DASTTLQSAA TCIPPPTTVR SVSMRDMGTE MTPIASQEPS RTGTPVRATS PNCSQPTTPR RTLGGPSAVG SFISHGGECS SSELSEQELQ TKTRREIMLL
401: GTQLGKTSIA AWASKKEEEK DASLSLKPVP MDQSTQNITA IRAAAWEEAE KAKYLARFKR EEIKIQAWED HQKAQIEAEM RKIEVEVERM RARAQDKLMT
501: KLASARHSAD EKRATAELKR NRAAARTAEQ AEHIRRTGRV PPSFGCWNWC S
001: MDYERIGKTQ VTSSGGGFSP GKLRSMLLLG VDRKKNEEEE STPTMRSGSN QIDDPRVYVA SGLDDCKDVD VVSEITDCST SGIARSISLG LQEYSDYDNV
101: NEIKSVSASS VFEFQKTEKE KVNQRMPIRS FSKPAPSKWD DAQKWIASPT ANRPKTGQVQ VPGSKKGPSF GRQSSMKIVE VAEHRVVEEP DTKRIDVSQV
201: KKDMGNKFGS WEVDSYTTVD SYVKPVLMVE NSIVESATEV NLSRHDSSVA TAFAQPPSTA RSVSMRDMGT EMTPIASQEP SRNGTPIRAT TPIRSPISSE
301: PSSPGRQASA SPMSNKELSE KELQMKTRRE IMVLGTQLGK FNIAAWASKE DEDKDASTSL KTKASLQTSK SVSEARATAW EEAEKAKHMA RFRREEMKIQ
401: AWENHQKAKS EAEMKKTEVK VERIKGRAQD RLMKKLATIE RKAEEKRAAA EAKKDHQAAK TEKQAEQIRR TGKVPSLLFS CFSFCS
101: NEIKSVSASS VFEFQKTEKE KVNQRMPIRS FSKPAPSKWD DAQKWIASPT ANRPKTGQVQ VPGSKKGPSF GRQSSMKIVE VAEHRVVEEP DTKRIDVSQV
201: KKDMGNKFGS WEVDSYTTVD SYVKPVLMVE NSIVESATEV NLSRHDSSVA TAFAQPPSTA RSVSMRDMGT EMTPIASQEP SRNGTPIRAT TPIRSPISSE
301: PSSPGRQASA SPMSNKELSE KELQMKTRRE IMVLGTQLGK FNIAAWASKE DEDKDASTSL KTKASLQTSK SVSEARATAW EEAEKAKHMA RFRREEMKIQ
401: AWENHQKAKS EAEMKKTEVK VERIKGRAQD RLMKKLATIE RKAEEKRAAA EAKKDHQAAK TEKQAEQIRR TGKVPSLLFS CFSFCS
Arabidopsis Description
At2g02170/F5O4.6 [Source:UniProtKB/TrEMBL;Acc:Q9ZUM1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.