Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES11442 | Sorghum | nucleus, plastid | 84.6 | 89.68 |
| Os04t0620200-01 | Rice | nucleus, plastid | 70.62 | 75.0 |
| TraesCS2A01G464000.1 | Wheat | nucleus, plastid | 67.96 | 73.0 |
| TraesCS2B01G485700.1 | Wheat | nucleus, plastid | 67.96 | 72.73 |
| TraesCS2D01G464900.1 | Wheat | nucleus, plastid | 67.26 | 71.83 |
| HORVU2Hr1G103570.7 | Barley | nucleus, plastid | 66.02 | 70.38 |
| VIT_10s0003g04090.t01 | Wine grape | nucleus | 40.0 | 42.97 |
| CDY09599 | Canola | nucleus | 34.87 | 41.39 |
| GSMUA_Achr5P26590_001 | Banana | nucleus | 36.99 | 41.06 |
| Bra032380.1-P | Field mustard | nucleus | 34.87 | 40.62 |
| CDY26269 | Canola | nucleus | 34.34 | 40.0 |
| KRH58701 | Soybean | nucleus | 38.23 | 40.0 |
| Zm00001d041496_P001 | Maize | nucleus | 26.9 | 39.9 |
| PGSC0003DMT400031464 | Potato | nucleus | 36.46 | 39.69 |
| KRH42599 | Soybean | nucleus | 37.88 | 39.63 |
| CDY12047 | Canola | nucleus | 34.69 | 39.2 |
| CDX90244 | Canola | nucleus | 34.16 | 38.6 |
| AT1G30320.1 | Thale cress | nucleus, plastid | 34.51 | 38.31 |
| KRH44798 | Soybean | nucleus | 37.35 | 38.29 |
| Solyc08g045640.2.1 | Tomato | mitochondrion | 32.92 | 37.65 |
| Bra010777.1-P | Field mustard | nucleus | 34.16 | 35.81 |
| Zm00001d027403_P001 | Maize | nucleus | 24.25 | 32.31 |
| Zm00001d048481_P001 | Maize | cytosol, mitochondrion, nucleus | 23.89 | 32.07 |
| Zm00001d051005_P001 | Maize | mitochondrion, nucleus | 17.17 | 31.19 |
| Zm00001d054034_P001 | Maize | nucleus | 29.73 | 30.49 |
| Zm00001d050790_P003 | Maize | nucleus | 17.35 | 28.91 |
| Zm00001d006626_P001 | Maize | nucleus | 10.97 | 23.75 |
| Zm00001d021839_P001 | Maize | nucleus | 12.04 | 23.13 |
| Zm00001d034558_P001 | Maize | nucleus | 10.09 | 21.92 |
| CDY62474 | Canola | nucleus | 27.26 | 17.62 |
| CDY62472 | Canola | nucleus | 27.26 | 17.62 |
| Zm00001d048829_P001 | Maize | plastid | 13.98 | 17.17 |
Protein Annotations
| EnsemblPlants:Zm00001d002274_P001 | EnsemblPlants:Zm00001d002274_T001 | EnsemblPlantsGene:Zm00001d002274 | InterPro:Remorin_C | ncoils:Coil | PANTHER:PTHR31471 |
| PANTHER:PTHR31471:SF17 | PFAM:PF03763 | ProteinID:ONM13796.1 | SEG:seg | UniParc:UPI0008447B90 | UniProt:A0A1D6DZ24 |
| MapMan:35.2 | : | : | : | : | : |
Description
Remorin family protein
Coordinates
chr2:-:9274911..9278376
Molecular Weight (calculated)
61847.9 Da
IEP (calculated)
9.209
GRAVY (calculated)
-0.660
Length
565 amino acids
Sequence
(BLAST)
(BLAST)
001: MEYERIHQKA QPGALSPTKL RMKILGAHNR VRVITSNSSS RTSPAKTIEA SQAQNRLLVC DVLEEDSADS TKHPSATNKT EAVEKVQKDP AVDISQVQNA
101: STSSAAKPAT GSSSMIQIHP LRPAEEDSTT ECDSGLDNAS TSSFEFHGVE KAAATQNPAA GYLSRQTSIS SKWNDAEKWI VSRQNVSQKN NVAKGALQNQ
201: TVNQMSSAAA RGAVVPKISA RPVQKMKRVN PALSAPRSIL ERLSFASYQP KLVRHADVCP VSNAGANSEH HKATDTGSSI EVKPCNDTND IPTVQSSVSV
301: RDVGTEMTPI PSQEPSRTGT PLGSRTPTRS PNCSVPSTPV GGRSIASPPG EDCTDDGPFF HRKCGVHANE LSDTETRLKT RQEIAALGIQ LGKMNIATWA
401: SKEELELVSA APSIADLERI RKEYAARAAS YEEAENTKHT ARFKKEEVKI EAWEGRQRAK IEYEMRRIEQ YRMLRYLEFN NLDVAVMSKN TLWQEFAERM
501: RSEAMEKMAE KLEMTRRIAE EKRASANAKM NQQAAIAVQK AEKIRQTGRV PGSSILRCGG CFCGP
101: STSSAAKPAT GSSSMIQIHP LRPAEEDSTT ECDSGLDNAS TSSFEFHGVE KAAATQNPAA GYLSRQTSIS SKWNDAEKWI VSRQNVSQKN NVAKGALQNQ
201: TVNQMSSAAA RGAVVPKISA RPVQKMKRVN PALSAPRSIL ERLSFASYQP KLVRHADVCP VSNAGANSEH HKATDTGSSI EVKPCNDTND IPTVQSSVSV
301: RDVGTEMTPI PSQEPSRTGT PLGSRTPTRS PNCSVPSTPV GGRSIASPPG EDCTDDGPFF HRKCGVHANE LSDTETRLKT RQEIAALGIQ LGKMNIATWA
401: SKEELELVSA APSIADLERI RKEYAARAAS YEEAENTKHT ARFKKEEVKI EAWEGRQRAK IEYEMRRIEQ YRMLRYLEFN NLDVAVMSKN TLWQEFAERM
501: RSEAMEKMAE KLEMTRRIAE EKRASANAKM NQQAAIAVQK AEKIRQTGRV PGSSILRCGG CFCGP
001: MDYERIQKVQ KSIISPTKLR MKLMGPLNNM KREGSKSNSN SSRTSPSRLQ IPDDSEFSKN SLLASNSYSD DDVAATTTDI EVAKLPNEPV LYPTENDNQG
101: SKDRCEGVVP RENDQPRLQQ FRKGDLNMAS PHIMRPQEDE NLDYDSNASS SSFEFHRARG ERSNQNHGSR GYPSRQMPSK WNDAEKWIMS RQNMVMRKNG
201: QGNRIPVRIV PDNAGYEHNK SRMDLCQSSQ VDGFEKFPNV VPSAPHPILT QEYGGDSLID QSTQSNDLAD SSHDHTTGGP AIRSVCMRDM GTEMTPIPSQ
301: EPSRSVTPVG ATTPLRSPTS SLPSTPRGGQ PEESSMSKNT RRELSEEEEK AKTRREIVAL GVQLGKMNIA AWASKEEEEN KKNNGDAEEA QKIEFEKRAT
401: AWEEAEKSKH NARYKREEIR IQAWESQEKA KLEAEMRRIE AKVEQMKAEA EAKIMKKIAL AKQRSEEKRA LAEARKTRDA EKAVAEAQYI RETGRIPASS
501: YKICCGWFS
101: SKDRCEGVVP RENDQPRLQQ FRKGDLNMAS PHIMRPQEDE NLDYDSNASS SSFEFHRARG ERSNQNHGSR GYPSRQMPSK WNDAEKWIMS RQNMVMRKNG
201: QGNRIPVRIV PDNAGYEHNK SRMDLCQSSQ VDGFEKFPNV VPSAPHPILT QEYGGDSLID QSTQSNDLAD SSHDHTTGGP AIRSVCMRDM GTEMTPIPSQ
301: EPSRSVTPVG ATTPLRSPTS SLPSTPRGGQ PEESSMSKNT RRELSEEEEK AKTRREIVAL GVQLGKMNIA AWASKEEEEN KKNNGDAEEA QKIEFEKRAT
401: AWEEAEKSKH NARYKREEIR IQAWESQEKA KLEAEMRRIE AKVEQMKAEA EAKIMKKIAL AKQRSEEKRA LAEARKTRDA EKAVAEAQYI RETGRIPASS
501: YKICCGWFS
Arabidopsis Description
Remorin family protein [Source:UniProtKB/TrEMBL;Acc:Q9C8G3]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.