Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 2
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES11442 | Sorghum | nucleus, plastid | 79.14 | 78.99 |
| TraesCS2A01G464000.1 | Wheat | nucleus, plastid | 76.69 | 77.57 |
| TraesCS2B01G485700.1 | Wheat | nucleus, plastid | 76.88 | 77.46 |
| TraesCS2D01G464900.1 | Wheat | nucleus, plastid | 76.32 | 76.75 |
| HORVU2Hr1G103570.7 | Barley | nucleus, plastid | 75.38 | 75.66 |
| Zm00001d002274_P001 | Maize | nucleus, plastid | 75.0 | 70.62 |
| VIT_10s0003g04090.t01 | Wine grape | nucleus | 43.61 | 44.11 |
| GSMUA_Achr5P26590_001 | Banana | nucleus | 40.98 | 42.83 |
| CDY09599 | Canola | nucleus | 37.97 | 42.44 |
| KRH42599 | Soybean | nucleus | 42.29 | 41.67 |
| KRH58701 | Soybean | nucleus | 42.29 | 41.67 |
| Bra032380.1-P | Field mustard | nucleus | 37.97 | 41.65 |
| CDY26269 | Canola | nucleus | 37.97 | 41.65 |
| CDY12047 | Canola | nucleus | 38.53 | 41.0 |
| PGSC0003DMT400031464 | Potato | nucleus | 39.85 | 40.85 |
| AT1G30320.1 | Thale cress | nucleus, plastid | 38.91 | 40.67 |
| KRH44798 | Soybean | nucleus | 42.11 | 40.65 |
| CDX90244 | Canola | nucleus | 37.97 | 40.4 |
| Solyc08g045640.2.1 | Tomato | mitochondrion | 36.65 | 39.47 |
| Os12t0613600-01 | Rice | nucleus | 30.64 | 38.17 |
| Bra010777.1-P | Field mustard | nucleus | 38.16 | 37.66 |
| Os03t0120200-01 | Rice | nucleus | 27.07 | 34.04 |
| Os02t0116800-01 | Rice | nucleus | 31.58 | 32.94 |
| Os02t0602000-01 | Rice | mitochondrion | 14.85 | 23.24 |
| Os07t0208600-01 | Rice | nucleus | 10.15 | 20.61 |
| Os07t0569100-01 | Rice | plasma membrane | 12.03 | 20.25 |
| Os03t0808300-01 | Rice | plasma membrane | 10.34 | 19.37 |
| Os11t0616300-01 | Rice | nucleus | 16.73 | 18.05 |
| CDY62474 | Canola | nucleus | 29.14 | 17.73 |
| CDY62472 | Canola | nucleus | 29.14 | 17.73 |
Protein Annotations
| EnsemblPlants:Os04t0620200-01 | EnsemblPlantsGene:Os04g0620200 | EntrezGene:4337028 | InterPro:Remorin_C | ncoils:Coil | PANTHER:PTHR31471 |
| PANTHER:PTHR31471:SF17 | PFAM:PF03763 | ProteinID:BAS91056.1 | RefSeq:XP_015634103.1 | SEG:seg | UniParc:UPI0001C7E18F |
| UniProt:A0A0P0WF23 | MapMan:35.2 | : | : | : | : |
Description
GRAIN SETTING DEFECT1Remorin protein, Grain setting (Os04t0620200-01)
Coordinates
chr4:+:31524614..31527861
Molecular Weight (calculated)
58340.6 Da
IEP (calculated)
8.942
GRAVY (calculated)
-0.757
Length
532 amino acids
Sequence
(BLAST)
(BLAST)
001: MEYERIHKVQ AGALSPTKLR MKLLGTHNRV RVISNSSSRT SPSKNTEPSQ AQNRLLVCDV LEEAVSGSSD GSKCSSAINK TEALEKDPPL DINKVEDMTK
101: SSVQQPASSN SSMIHPVRTI EEESNDCDSG IDNASTSSFE FHGGEKTAAQ NPTSGYFSRQ TSSKWNDAEK WIVNKQNVQQ NISKGAPQNQ SAQQMNSAAG
201: RGFIVPKISN RNIIPRPMQN MKRPSPASSA SRSILERLSF GSHQPKLVRH ADVCTVNNAG VTSEYQTKAT DNSSSIEIRP YKDPKAIPAV HSVSVRDVGT
301: EMTPIPSQDP SRTGTPLGSM TPTRSPNCSI PSTPVGGRST ASPGDDNTDD GPYFNRKGGT NEISDDEMRL KTRKEIAALG IQLGKMNIAT WASKEELELV
401: SASPSIADLE RMKKEYAARA AAYEEAENFK HTARFKKEEL KIEAWESLQK AKIESEMKRI EEHAEKLRSE AMAKMAEKLE MTRRLAEEKR ASANARMNQQ
501: AAKAVHKAEL IRQTGRVPGS CILCCSGCFC QH
101: SSVQQPASSN SSMIHPVRTI EEESNDCDSG IDNASTSSFE FHGGEKTAAQ NPTSGYFSRQ TSSKWNDAEK WIVNKQNVQQ NISKGAPQNQ SAQQMNSAAG
201: RGFIVPKISN RNIIPRPMQN MKRPSPASSA SRSILERLSF GSHQPKLVRH ADVCTVNNAG VTSEYQTKAT DNSSSIEIRP YKDPKAIPAV HSVSVRDVGT
301: EMTPIPSQDP SRTGTPLGSM TPTRSPNCSI PSTPVGGRST ASPGDDNTDD GPYFNRKGGT NEISDDEMRL KTRKEIAALG IQLGKMNIAT WASKEELELV
401: SASPSIADLE RMKKEYAARA AAYEEAENFK HTARFKKEEL KIEAWESLQK AKIESEMKRI EEHAEKLRSE AMAKMAEKLE MTRRLAEEKR ASANARMNQQ
501: AAKAVHKAEL IRQTGRVPGS CILCCSGCFC QH
001: MDYERIQKVQ KSIISPTKLR MKLMGPLNNM KREGSKSNSN SSRTSPSRLQ IPDDSEFSKN SLLASNSYSD DDVAATTTDI EVAKLPNEPV LYPTENDNQG
101: SKDRCEGVVP RENDQPRLQQ FRKGDLNMAS PHIMRPQEDE NLDYDSNASS SSFEFHRARG ERSNQNHGSR GYPSRQMPSK WNDAEKWIMS RQNMVMRKNG
201: QGNRIPVRIV PDNAGYEHNK SRMDLCQSSQ VDGFEKFPNV VPSAPHPILT QEYGGDSLID QSTQSNDLAD SSHDHTTGGP AIRSVCMRDM GTEMTPIPSQ
301: EPSRSVTPVG ATTPLRSPTS SLPSTPRGGQ PEESSMSKNT RRELSEEEEK AKTRREIVAL GVQLGKMNIA AWASKEEEEN KKNNGDAEEA QKIEFEKRAT
401: AWEEAEKSKH NARYKREEIR IQAWESQEKA KLEAEMRRIE AKVEQMKAEA EAKIMKKIAL AKQRSEEKRA LAEARKTRDA EKAVAEAQYI RETGRIPASS
501: YKICCGWFS
101: SKDRCEGVVP RENDQPRLQQ FRKGDLNMAS PHIMRPQEDE NLDYDSNASS SSFEFHRARG ERSNQNHGSR GYPSRQMPSK WNDAEKWIMS RQNMVMRKNG
201: QGNRIPVRIV PDNAGYEHNK SRMDLCQSSQ VDGFEKFPNV VPSAPHPILT QEYGGDSLID QSTQSNDLAD SSHDHTTGGP AIRSVCMRDM GTEMTPIPSQ
301: EPSRSVTPVG ATTPLRSPTS SLPSTPRGGQ PEESSMSKNT RRELSEEEEK AKTRREIVAL GVQLGKMNIA AWASKEEEEN KKNNGDAEEA QKIEFEKRAT
401: AWEEAEKSKH NARYKREEIR IQAWESQEKA KLEAEMRRIE AKVEQMKAEA EAKIMKKIAL AKQRSEEKRA LAEARKTRDA EKAVAEAQYI RETGRIPASS
501: YKICCGWFS
Arabidopsis Description
Remorin family protein [Source:UniProtKB/TrEMBL;Acc:Q9C8G3]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.