Factsheet for Os07t0569100-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1
plasma membrane 1
plastid 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os02t0747400-01
Os06t0226700-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G57540.1	Os02t0747400-01	AT3G47620.1	21798944
AT3G57540.1	Os06t0226700-01	AT3G47620.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G039030.1	Barley	cytosol, nucleus	65.19	81.1
Zm00001d006626_P001	Maize	nucleus	65.82	79.69
Zm00001d021839_P001	Maize	nucleus	71.52	76.87
EER99573	Sorghum	nucleus	75.95	76.68
TraesCS2D01G206900.1	Wheat	cytosol, plastid	74.68	76.38
TraesCS2A01G199300.1	Wheat	nucleus	75.0	76.21
Solyc10g080240.1.1	Tomato	cytosol	12.03	76.0
TraesCS2B01G226600.1	Wheat	cytosol, nucleus, plastid	73.1	75.0
GSMUA_Achr6P00160_001	Banana	nucleus	51.58	60.15
GSMUA_Achr4P33120_001	Banana	nucleus	50.63	58.82
VIT_08s0007g08280.t01	Wine grape	nucleus	49.37	57.56
GSMUA_Achr2P13770_001	Banana	cytosol, nucleus, plastid	50.0	56.43
Os03t0808300-01	Rice	plasma membrane	50.0	55.63
KRG95278	Soybean	nucleus	45.25	52.77
Os07t0208600-01	Rice	nucleus	43.35	52.29
KRH71974	Soybean	nucleus	47.78	50.5
PGSC0003DMT400060978	Potato	nucleus	45.89	49.49
KRH33097	Soybean	nucleus	46.2	49.32
Solyc04g015520.2.1	Tomato	nucleus	47.15	49.17
PGSC0003DMT400070037	Potato	nucleus	46.84	46.69
AT2G41870.1	Thale cress	nucleus	39.87	45.99
CDX79905	Canola	nucleus	38.92	45.72
Bra004657.1-P	Field mustard	cytosol	38.92	45.56
CDY48774	Canola	nucleus	38.61	45.19
CDX72021	Canola	nucleus	38.61	44.85
Solyc10g080230.1.1	Tomato	cytosol	22.15	44.3
CDY06095	Canola	nucleus	40.19	43.34
Bra007335.1-P	Field mustard	nucleus	40.19	43.34
AT3G57540.1	Thale cress	nucleus	39.56	42.23
KRH66963	Soybean	nucleus	28.48	40.0
Os03t0120200-01	Rice	nucleus	23.1	17.26
Os02t0116800-01	Rice	nucleus	25.32	15.69
Os02t0602000-01	Rice	mitochondrion	15.51	14.41
Os12t0613600-01	Rice	nucleus	18.04	13.35
Os11t0616300-01	Rice	nucleus	19.94	12.78
Os04t0620200-01	Rice	nucleus, plastid	20.25	12.03

Protein Annotations

MapMan:35.1	EntrezGene:4343649	ProteinID:BAC79688.1	ProteinID:BAF21950.1	ProteinID:BAT02216.1	ncoils:Coil
ProteinID:EAZ40353.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009719	GO:GO:0009738
GO:GO:0009987	GO:GO:0016020	GO:GO:1900458	EnsemblPlantsGene:Os07g0569100	EnsemblPlants:Os07t0569100-01	PFAM:PF03763
PANTHER:PTHR31471	PANTHER:PTHR31471:SF39	UniProt:Q7XII4	InterPro:Remorin_C	UniParc:UPI00001B39C8	RefSeq:XP_015646986.1
SEG:seg	:	:	:	:	:

Description

REMORIN 4.1Remorin protein, Coordination of interlink between abscisic acid (ABA) and brassinosteroid (BR) signaling (Os07t0569100-01)

Coordinates

chr7:-:22889318..22890939

Molecular Weight (calculated)

34097.5 Da

IEP (calculated)

5.828

GRAVY (calculated)

-0.706

Length

316 amino acids

Sequence
(BLAST)

001: MLSEQTAASG SSSSSRGADD REIVISTGRE IVVRSSGGEE REEEVVVEEE LEEPEFRDIH ALSPPPTPTP SQPSSSYHRR RRESWESAAG SRHTSIRSVG
101: SDTAPSELFP TMSREFSAMV AAAANANAAA AAAANGGDSS RAGVDDALGR IGEDELEETN PLAIVPDSNP IPSPRRAHLA LPAPGDVSSA GGGHGDEVSV
201: GQVKKEEVES KIAAWQIAEV AKVNNRFKRE EVVINGWEGD QVEKANAWLK KYERKLEEKR AKAMEKAQNE VAKARRKAEE KRASAEAKRG TKVARVLELA
301: NFMRAVGRAP SKRSFF

Best Arabidopsis Sequence Match ( AT3G57540.1 )
(BLAST)

001: MLTLYGQERS PENSTTSTTD ASDRRDETPS SEIVVRDIHA MTTTTELTRP QQRGSGGGYL SPSRSIAFSD GTTSSGENFT TVSREFNALV IAGSSMDNNS
101: NGTNQSGGHR DVIRDERNEL TRIGENDDVG DHGQVPEEDS NPWAIVPDDY NNRDGSENNI VLASSGGQNR MVTTASVQRV KREEVEAKIT AWQTAKVAKI
201: NNRFKRQDAV INGWLNEQVH RANSWMKKIE RKLEDRRAKA MEKTQNKVAK AQRKAEERRA TAEGKRGTEV ARVLEVANLM RAVGRPPAKR SFFSLS

Arabidopsis Description

Remorin family protein [Source:UniProtKB/TrEMBL;Acc:Q93YN8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.