Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- plastid 2
- nucleus 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G206900.1 | Wheat | cytosol, plastid | 95.45 | 95.15 |
| HORVU2Hr1G039030.1 | Barley | cytosol, nucleus | 77.92 | 94.49 |
| TraesCS2A01G199300.1 | Wheat | nucleus | 95.13 | 94.21 |
| Zm00001d006626_P001 | Maize | nucleus | 64.94 | 76.63 |
| Zm00001d021839_P001 | Maize | nucleus | 71.1 | 74.49 |
| Os07t0569100-01 | Rice | plasma membrane | 75.0 | 73.1 |
| EER99573 | Sorghum | nucleus | 74.03 | 72.84 |
| Solyc10g080240.1.1 | Tomato | cytosol | 11.69 | 72.0 |
| GSMUA_Achr6P00160_001 | Banana | nucleus | 49.35 | 56.09 |
| GSMUA_Achr4P33120_001 | Banana | nucleus | 49.03 | 55.51 |
| GSMUA_Achr2P13770_001 | Banana | cytosol, nucleus, plastid | 49.35 | 54.29 |
| VIT_08s0007g08280.t01 | Wine grape | nucleus | 46.43 | 52.77 |
| KRG95278 | Soybean | nucleus | 45.78 | 52.03 |
| TraesCS5B01G476700.1 | Wheat | nucleus | 50.97 | 51.31 |
| KRH71974 | Soybean | nucleus | 48.05 | 49.5 |
| KRH33097 | Soybean | nucleus | 47.4 | 49.32 |
| TraesCS7B01G342300.1 | Wheat | nucleus | 43.18 | 47.84 |
| PGSC0003DMT400060978 | Potato | nucleus | 45.13 | 47.44 |
| CDX79905 | Canola | nucleus | 40.26 | 46.1 |
| Solyc04g015520.2.1 | Tomato | nucleus | 45.13 | 45.87 |
| AT2G41870.1 | Thale cress | nucleus | 40.26 | 45.26 |
| CDX72021 | Canola | nucleus | 39.94 | 45.22 |
| Bra004657.1-P | Field mustard | cytosol | 39.61 | 45.19 |
| Solyc10g080230.1.1 | Tomato | cytosol | 23.05 | 44.94 |
| CDY48774 | Canola | nucleus | 39.29 | 44.81 |
| PGSC0003DMT400070037 | Potato | nucleus | 45.45 | 44.16 |
| Bra007335.1-P | Field mustard | nucleus | 41.56 | 43.69 |
| CDY06095 | Canola | nucleus | 41.56 | 43.69 |
| AT3G57540.1 | Thale cress | nucleus | 41.56 | 43.24 |
| KRH66963 | Soybean | nucleus | 28.57 | 39.11 |
| TraesCS4B01G076500.1 | Wheat | nucleus | 21.75 | 18.93 |
| TraesCS4B01G349100.1 | Wheat | nucleus | 23.38 | 16.98 |
| TraesCS6B01G062500.1 | Wheat | nucleus | 24.03 | 14.57 |
| TraesCS2B01G363600.1 | Wheat | plastid | 16.88 | 12.59 |
| TraesCS2B01G485700.1 | Wheat | nucleus, plastid | 21.43 | 12.5 |
| TraesCS5B01G041700.1 | Wheat | mitochondrion, nucleus | 17.21 | 11.25 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G226600.1 | EnsemblPlantsGene:TraesCS2B01G226600 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009738 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:1900458 | InterPro:Remorin_C | ncoils:Coil | PANTHER:PTHR31471 | PANTHER:PTHR31471:SF39 | PFAM:PF03763 |
| SEG:seg | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr2B:+:217396708..217398274
Molecular Weight (calculated)
33231.7 Da
IEP (calculated)
7.784
GRAVY (calculated)
-0.638
Length
308 amino acids
Sequence
(BLAST)
(BLAST)
001: MLSGQTAVSG SSSSIIIVSR GVEQGSGSGE QNQWRPIEEE EVEPEFRDIH ALSPPRALSL YRRSQPGSRD SWGSAAGAGG SRHTSIRSVG SDTAPSELFP
101: TMSREFSAMV AAAASANASS SAAAGHRESV DRVANEDALE RIGEEELEET NPLAIVPDSN PIPSPRRGLS PRPVAGGEVA VPGAGQGDEV SVGQVKKDEV
201: ETKIAAWQIA EVAKVNNRFK REEVVINGWE GDQVEKASAW LNKYERKLEE KRAKAMEKAQ NEVARARRKA EDRRASAEAK RGTKVARVLE LANFMRAVGR
301: APTKRSFF
101: TMSREFSAMV AAAASANASS SAAAGHRESV DRVANEDALE RIGEEELEET NPLAIVPDSN PIPSPRRGLS PRPVAGGEVA VPGAGQGDEV SVGQVKKDEV
201: ETKIAAWQIA EVAKVNNRFK REEVVINGWE GDQVEKASAW LNKYERKLEE KRAKAMEKAQ NEVARARRKA EDRRASAEAK RGTKVARVLE LANFMRAVGR
301: APTKRSFF
001: MLTLYGQERS PENSTTSTTD ASDRRDETPS SEIVVRDIHA MTTTTELTRP QQRGSGGGYL SPSRSIAFSD GTTSSGENFT TVSREFNALV IAGSSMDNNS
101: NGTNQSGGHR DVIRDERNEL TRIGENDDVG DHGQVPEEDS NPWAIVPDDY NNRDGSENNI VLASSGGQNR MVTTASVQRV KREEVEAKIT AWQTAKVAKI
201: NNRFKRQDAV INGWLNEQVH RANSWMKKIE RKLEDRRAKA MEKTQNKVAK AQRKAEERRA TAEGKRGTEV ARVLEVANLM RAVGRPPAKR SFFSLS
101: NGTNQSGGHR DVIRDERNEL TRIGENDDVG DHGQVPEEDS NPWAIVPDDY NNRDGSENNI VLASSGGQNR MVTTASVQRV KREEVEAKIT AWQTAKVAKI
201: NNRFKRQDAV INGWLNEQVH RANSWMKKIE RKLEDRRAKA MEKTQNKVAK AQRKAEERRA TAEGKRGTEV ARVLEVANLM RAVGRPPAKR SFFSLS
Arabidopsis Description
Remorin family protein [Source:UniProtKB/TrEMBL;Acc:Q93YN8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.