Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 1
- nucleus 2
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G206900.1 | Wheat | cytosol, plastid | 95.82 | 96.44 |
| TraesCS2B01G226600.1 | Wheat | cytosol, nucleus, plastid | 94.21 | 95.13 |
| HORVU2Hr1G039030.1 | Barley | cytosol, nucleus | 77.49 | 94.88 |
| Zm00001d006626_P001 | Maize | nucleus | 64.95 | 77.39 |
| Zm00001d021839_P001 | Maize | nucleus | 72.03 | 76.19 |
| Os07t0569100-01 | Rice | plasma membrane | 76.21 | 75.0 |
| EER99573 | Sorghum | nucleus | 74.92 | 74.44 |
| Solyc10g080240.1.1 | Tomato | cytosol | 11.9 | 74.0 |
| GSMUA_Achr6P00160_001 | Banana | nucleus | 49.52 | 56.83 |
| GSMUA_Achr4P33120_001 | Banana | nucleus | 48.55 | 55.51 |
| GSMUA_Achr2P13770_001 | Banana | cytosol, nucleus, plastid | 49.2 | 54.64 |
| VIT_08s0007g08280.t01 | Wine grape | nucleus | 46.3 | 53.14 |
| KRG95278 | Soybean | nucleus | 45.34 | 52.03 |
| TraesCS5A01G464900.1 | Wheat | nucleus | 50.8 | 51.3 |
| KRH71974 | Soybean | nucleus | 47.91 | 49.83 |
| KRH33097 | Soybean | nucleus | 46.3 | 48.65 |
| TraesCS7A01G443500.1 | Wheat | nucleus | 43.41 | 47.54 |
| PGSC0003DMT400060978 | Potato | nucleus | 44.69 | 47.44 |
| Solyc04g015520.2.1 | Tomato | nucleus | 45.02 | 46.2 |
| CDX79905 | Canola | nucleus | 39.55 | 45.72 |
| Solyc10g080230.1.1 | Tomato | cytosol | 23.15 | 45.57 |
| Bra004657.1-P | Field mustard | cytosol | 38.91 | 44.81 |
| PGSC0003DMT400070037 | Potato | nucleus | 45.66 | 44.8 |
| AT2G41870.1 | Thale cress | nucleus | 39.23 | 44.53 |
| CDX72021 | Canola | nucleus | 38.91 | 44.49 |
| CDY48774 | Canola | nucleus | 38.59 | 44.44 |
| Bra007335.1-P | Field mustard | nucleus | 40.19 | 42.66 |
| CDY06095 | Canola | nucleus | 40.19 | 42.66 |
| AT3G57540.1 | Thale cress | nucleus | 40.19 | 42.23 |
| KRH66963 | Soybean | nucleus | 28.62 | 39.56 |
| TraesCS4A01G238400.1 | Wheat | nucleus | 22.19 | 19.77 |
| TraesCS5A01G517700.1 | Wheat | nucleus | 23.15 | 17.06 |
| TraesCS6A01G046400.1 | Wheat | nucleus | 24.12 | 14.76 |
| TraesCS2A01G464000.1 | Wheat | nucleus, plastid | 22.51 | 13.31 |
| TraesCS5A01G040500.1 | Wheat | nucleus | 16.72 | 11.58 |
Protein Annotations
| MapMan:35.1 | ncoils:Coil | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009738 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:1900458 | PFAM:PF03763 | PANTHER:PTHR31471 | PANTHER:PTHR31471:SF39 | InterPro:Remorin_C | EnsemblPlantsGene:TraesCS2A01G199300 |
| EnsemblPlants:TraesCS2A01G199300.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr2A:+:171948414..171949456
Molecular Weight (calculated)
33346.7 Da
IEP (calculated)
9.470
GRAVY (calculated)
-0.698
Length
311 amino acids
Sequence
(BLAST)
(BLAST)
001: MLSGQTAVSG SSSSSSSSIV SRGVEQGSGS GEQQQHQRLP IEEEEEEPEF RDIHALSPPR ALSLYRRSRP GSRDSWGSAA GAGGSRHTSI RSVGSDTAPS
101: ELFPTMSREF SAMVAAAASA NASSSAAAGH RESVDRAANE DALGRIGEEE LEETNPLAIV PDSNPIPSPR RGLSPRPVEV AAPGAGAGQG DEVSVGQVKK
201: GEVETKIAAW QIAEVAKVNN RFKREEVVIN GWEGDQVEKA SAWLNKYERK LEEKRAKAME KAQNEVARAR RKAEDKRASA EAKRGTKVAR VLELANFMRA
301: VGRAPTKRSF F
101: ELFPTMSREF SAMVAAAASA NASSSAAAGH RESVDRAANE DALGRIGEEE LEETNPLAIV PDSNPIPSPR RGLSPRPVEV AAPGAGAGQG DEVSVGQVKK
201: GEVETKIAAW QIAEVAKVNN RFKREEVVIN GWEGDQVEKA SAWLNKYERK LEEKRAKAME KAQNEVARAR RKAEDKRASA EAKRGTKVAR VLELANFMRA
301: VGRAPTKRSF F
001: MLTLYGQERS PENSTTSTTD ASDRRDETPS SEIVVRDIHA MTTTTELTRP QQRGSGGGYL SPSRSIAFSD GTTSSGENFT TVSREFNALV IAGSSMDNNS
101: NGTNQSGGHR DVIRDERNEL TRIGENDDVG DHGQVPEEDS NPWAIVPDDY NNRDGSENNI VLASSGGQNR MVTTASVQRV KREEVEAKIT AWQTAKVAKI
201: NNRFKRQDAV INGWLNEQVH RANSWMKKIE RKLEDRRAKA MEKTQNKVAK AQRKAEERRA TAEGKRGTEV ARVLEVANLM RAVGRPPAKR SFFSLS
101: NGTNQSGGHR DVIRDERNEL TRIGENDDVG DHGQVPEEDS NPWAIVPDDY NNRDGSENNI VLASSGGQNR MVTTASVQRV KREEVEAKIT AWQTAKVAKI
201: NNRFKRQDAV INGWLNEQVH RANSWMKKIE RKLEDRRAKA MEKTQNKVAK AQRKAEERRA TAEGKRGTEV ARVLEVANLM RAVGRPPAKR SFFSLS
Arabidopsis Description
Remorin family protein [Source:UniProtKB/TrEMBL;Acc:Q93YN8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.