Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- plasma membrane 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os02t0747400-01 | |
| Os06t0226700-01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G57540.1 | Os02t0747400-01 | AT3G47620.1 | 21798944 |
| AT3G57540.1 | Os06t0226700-01 | AT3G47620.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G100790.1 | Barley | nucleus | 62.6 | 58.99 |
| TraesCS7D01G432700.1 | Wheat | nucleus | 61.83 | 58.48 |
| TraesCS7B01G342300.1 | Wheat | nucleus | 61.07 | 57.55 |
| TraesCS7A01G443500.1 | Wheat | nucleus | 61.07 | 56.34 |
| Solyc10g080240.1.1 | Tomato | cytosol | 10.69 | 56.0 |
| Os03t0808300-01 | Rice | plasma membrane | 54.2 | 50.0 |
| GSMUA_Achr6P00160_001 | Banana | nucleus | 48.09 | 46.49 |
| GSMUA_Achr4P33120_001 | Banana | nucleus | 46.95 | 45.22 |
| GSMUA_Achr2P13770_001 | Banana | cytosol, nucleus, plastid | 47.33 | 44.29 |
| VIT_08s0007g08280.t01 | Wine grape | nucleus | 45.42 | 43.91 |
| Os07t0569100-01 | Rice | plasma membrane | 52.29 | 43.35 |
| KRG95278 | Soybean | nucleus | 44.27 | 42.8 |
| Bra004657.1-P | Field mustard | cytosol | 43.13 | 41.85 |
| CDX79905 | Canola | nucleus | 42.75 | 41.64 |
| CDY48774 | Canola | nucleus | 42.37 | 41.11 |
| AT2G41870.1 | Thale cress | nucleus | 42.75 | 40.88 |
| Solyc04g015520.2.1 | Tomato | nucleus | 46.56 | 40.26 |
| PGSC0003DMT400060978 | Potato | nucleus | 44.27 | 39.59 |
| KRH33097 | Soybean | nucleus | 44.66 | 39.53 |
| KRH71974 | Soybean | nucleus | 45.04 | 39.46 |
| CDX72021 | Canola | nucleus | 40.46 | 38.97 |
| PGSC0003DMT400070037 | Potato | nucleus | 46.95 | 38.8 |
| CDY06095 | Canola | nucleus | 42.75 | 38.23 |
| Solyc10g080230.1.1 | Tomato | cytosol | 22.9 | 37.97 |
| Bra007335.1-P | Field mustard | nucleus | 42.37 | 37.88 |
| AT3G57540.1 | Thale cress | nucleus | 42.75 | 37.84 |
| KRH66963 | Soybean | nucleus | 28.24 | 32.89 |
| Os03t0120200-01 | Rice | nucleus | 23.66 | 14.66 |
| Os02t0116800-01 | Rice | nucleus | 27.1 | 13.92 |
| Os12t0613600-01 | Rice | nucleus | 20.99 | 12.88 |
| Os02t0602000-01 | Rice | mitochondrion | 16.41 | 12.65 |
| Os11t0616300-01 | Rice | nucleus | 19.47 | 10.34 |
| Os04t0620200-01 | Rice | nucleus, plastid | 20.61 | 10.15 |
Protein Annotations
| EMBL:AK067003 | EnsemblPlants:Os07t0208600-01 | EnsemblPlantsGene:Os07g0208600 | EntrezGene:4342700 | InterPro:Remorin_C | ncoils:Coil |
| PANTHER:PTHR31471 | PANTHER:PTHR31471:SF11 | PFAM:PF03763 | ProteinID:BAC57283.1 | ProteinID:BAD30176.1 | ProteinID:BAF21077.1 |
| ProteinID:BAT00575.1 | ProteinID:EAZ39085.1 | RefSeq:XP_015645506.1 | SEG:seg | UniParc:UPI00000044B5 | UniProt:Q84ZN5 |
| MapMan:35.2 | : | : | : | : | : |
Description
REMORIN 4.3Remorin, C-terminal region domain containing protein. (Os07t0208600-01)
Coordinates
chr7:+:5864737..5865808
Molecular Weight (calculated)
28021.6 Da
IEP (calculated)
5.300
GRAVY (calculated)
-0.605
Length
262 amino acids
Sequence
(BLAST)
(BLAST)
001: MLGSDQLEHR PAPSAPRAEP DDVADDVEVE AFRDIHPEPS PPHLPPPPLR QPSWDAASHR SLSSSGAGGG GDVELFATMS REFTAMVAAG SSSAPSPDVP
101: GDAPAAADLN LLQLARIGEN EPAAEANALA IVPAAAGSGP PAPVEQVKKE EVEAKVAAWQ AEEVAKINNK FKREEVVING WESQQVDKAT AWLAKIERKL
201: EEERAKATEK ARNEAAAARR KAEERRASAE ARRGRKTAEV LDRANFCKAA GRVPSKRSFF SF
101: GDAPAAADLN LLQLARIGEN EPAAEANALA IVPAAAGSGP PAPVEQVKKE EVEAKVAAWQ AEEVAKINNK FKREEVVING WESQQVDKAT AWLAKIERKL
201: EEERAKATEK ARNEAAAARR KAEERRASAE ARRGRKTAEV LDRANFCKAA GRVPSKRSFF SF
001: MLTLYHQERS PDATSNDRDE TPETVVREVH ALTPAPEDNS RTMTATLPPP PAFRGYFSPP RSATTMSEGE NFTTISREFN ALVIAGSSME NNELMTRDVT
101: QREDERQDEL MRIHEDTDHE EETNPLAIVP DQYPGSGLDP GSDNGPGQSR VGSTVQRVKR EEVEAKITAW QTAKLAKINN RFKREDAVIN GWFNEQVNKA
201: NSWMKKIERK LEERKAKAME KTQNNVAKAQ RKAEERRATA EAKRGTEVAK VVEVANLMRA LGRPPAKRSF FSFS
101: QREDERQDEL MRIHEDTDHE EETNPLAIVP DQYPGSGLDP GSDNGPGQSR VGSTVQRVKR EEVEAKITAW QTAKLAKINN RFKREDAVIN GWFNEQVNKA
201: NSWMKKIERK LEERKAKAME KTQNNVAKAQ RKAEERRATA EAKRGTEVAK VVEVANLMRA LGRPPAKRSF FSFS
Arabidopsis Description
Putative DNA binding protein [Source:UniProtKB/TrEMBL;Acc:P93758]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.