Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 2
- cytosol 1
- plasma membrane 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d002274_P001 | Maize | nucleus, plastid | 89.68 | 84.6 |
| Os04t0620200-01 | Rice | nucleus, plastid | 78.99 | 79.14 |
| TraesCS2A01G464000.1 | Wheat | nucleus, plastid | 74.86 | 75.86 |
| TraesCS2B01G485700.1 | Wheat | nucleus, plastid | 75.05 | 75.76 |
| TraesCS2D01G464900.1 | Wheat | nucleus, plastid | 73.92 | 74.48 |
| HORVU2Hr1G103570.7 | Barley | nucleus, plastid | 73.17 | 73.58 |
| VIT_10s0003g04090.t01 | Wine grape | nucleus | 42.4 | 42.97 |
| GSMUA_Achr5P26590_001 | Banana | nucleus | 39.59 | 41.45 |
| CDY09599 | Canola | nucleus | 36.77 | 41.18 |
| Bra032380.1-P | Field mustard | nucleus | 37.15 | 40.82 |
| PGSC0003DMT400031464 | Potato | nucleus | 39.02 | 40.08 |
| CDY26269 | Canola | nucleus | 36.4 | 40.0 |
| KRH58701 | Soybean | nucleus | 40.53 | 40.0 |
| KRH42599 | Soybean | nucleus | 40.15 | 39.63 |
| CDY12047 | Canola | nucleus | 36.96 | 39.4 |
| AT1G30320.1 | Thale cress | nucleus, plastid | 37.52 | 39.29 |
| CDX90244 | Canola | nucleus | 36.21 | 38.6 |
| Solyc08g045640.2.1 | Tomato | mitochondrion | 35.46 | 38.26 |
| KRH44798 | Soybean | nucleus | 39.4 | 38.11 |
| KXG23993 | Sorghum | nucleus | 30.96 | 35.87 |
| Bra010777.1-P | Field mustard | nucleus | 36.21 | 35.81 |
| KXG40319 | Sorghum | nucleus | 26.08 | 32.78 |
| EES05380 | Sorghum | mitochondrion | 18.39 | 29.43 |
| EES06158 | Sorghum | nucleus, plastid | 31.33 | 29.3 |
| OQU85140 | Sorghum | cytosol | 18.39 | 27.3 |
| EER99573 | Sorghum | nucleus | 12.38 | 21.09 |
| OQU90788 | Sorghum | nucleus | 10.32 | 18.84 |
| CDY62474 | Canola | nucleus | 28.71 | 17.51 |
| CDY62472 | Canola | nucleus | 28.71 | 17.51 |
| EES10116 | Sorghum | nucleus, plastid | 15.76 | 16.44 |
Protein Annotations
| EnsemblPlants:EES11442 | EnsemblPlantsGene:SORBI_3006G219500 | EntrezGene:8074723 | InterPro:Remorin_C | ncoils:Coil | PANTHER:PTHR31471 |
| PANTHER:PTHR31471:SF17 | PFAM:PF03763 | ProteinID:EES11442 | ProteinID:EES11442.1 | RefSeq:XP_002447114.1 | SEG:seg |
| unigene:Sbi.9744 | UniParc:UPI0001A86F9A | UniProt:C5YG53 | MapMan:35.2 | : | : |
Description
hypothetical protein
Coordinates
chr6:+:56670879..56674646
Molecular Weight (calculated)
58105.4 Da
IEP (calculated)
8.983
GRAVY (calculated)
-0.698
Length
533 amino acids
Sequence
(BLAST)
(BLAST)
001: MEYERIHQKA QPGALSPTKL RMKIMGAHNR VRVITSNSSS RTSPAKNIEA SQAQNRLLVC DVLEEVSDST SDGTKHPSAV NKTEAVEKDS AVDSNKVQNI
101: SKSSVPQPAT GSSSMIHPVR PVEEDSTECD SGLDNASTSS FEFHGVEKTA TQNPAHGYLS RQTSISSKWN DAEKWIVNRQ NVNQNITKGT AQNQTVNQMN
201: SAAARGAIVP KISGRPVQKM KRVNPALSAP RSILERLSFA SYQPKLVRHA DVCPVSNASA NSECHKATDT GSSIEMKPCN EANAIPAVQS VSVRDVGTEM
301: TPIPSQEPSR TGTPLGSRTP TRSPNCSIPS TPVGGRSIAS PGEECTDDGP YFNRKGVAHA NELSDTETRL KTRQEIAALG IQLGKMNIAT WASKEELELV
401: SAAPSIADLE RMKKEYAARA ASYEEAENTK HTARFKKEEV KIEAWESRQR GKIESEMRRI EEHAERMRSE AMAKMAEKLE MTRRIAEEKR ASANAKMNQQ
501: AAIAVQKAEK IRQTGRVPGS SILCCSGCFC GPY
101: SKSSVPQPAT GSSSMIHPVR PVEEDSTECD SGLDNASTSS FEFHGVEKTA TQNPAHGYLS RQTSISSKWN DAEKWIVNRQ NVNQNITKGT AQNQTVNQMN
201: SAAARGAIVP KISGRPVQKM KRVNPALSAP RSILERLSFA SYQPKLVRHA DVCPVSNASA NSECHKATDT GSSIEMKPCN EANAIPAVQS VSVRDVGTEM
301: TPIPSQEPSR TGTPLGSRTP TRSPNCSIPS TPVGGRSIAS PGEECTDDGP YFNRKGVAHA NELSDTETRL KTRQEIAALG IQLGKMNIAT WASKEELELV
401: SAAPSIADLE RMKKEYAARA ASYEEAENTK HTARFKKEEV KIEAWESRQR GKIESEMRRI EEHAERMRSE AMAKMAEKLE MTRRIAEEKR ASANAKMNQQ
501: AAIAVQKAEK IRQTGRVPGS SILCCSGCFC GPY
001: MDYERIQKVQ KSIISPTKLR MKLMGPLNNM KREGSKSNSN SSRTSPSRLQ IPDDSEFSKN SLLASNSYSD DDVAATTTDI EVAKLPNEPV LYPTENDNQG
101: SKDRCEGVVP RENDQPRLQQ FRKGDLNMAS PHIMRPQEDE NLDYDSNASS SSFEFHRARG ERSNQNHGSR GYPSRQMPSK WNDAEKWIMS RQNMVMRKNG
201: QGNRIPVRIV PDNAGYEHNK SRMDLCQSSQ VDGFEKFPNV VPSAPHPILT QEYGGDSLID QSTQSNDLAD SSHDHTTGGP AIRSVCMRDM GTEMTPIPSQ
301: EPSRSVTPVG ATTPLRSPTS SLPSTPRGGQ PEESSMSKNT RRELSEEEEK AKTRREIVAL GVQLGKMNIA AWASKEEEEN KKNNGDAEEA QKIEFEKRAT
401: AWEEAEKSKH NARYKREEIR IQAWESQEKA KLEAEMRRIE AKVEQMKAEA EAKIMKKIAL AKQRSEEKRA LAEARKTRDA EKAVAEAQYI RETGRIPASS
501: YKICCGWFS
101: SKDRCEGVVP RENDQPRLQQ FRKGDLNMAS PHIMRPQEDE NLDYDSNASS SSFEFHRARG ERSNQNHGSR GYPSRQMPSK WNDAEKWIMS RQNMVMRKNG
201: QGNRIPVRIV PDNAGYEHNK SRMDLCQSSQ VDGFEKFPNV VPSAPHPILT QEYGGDSLID QSTQSNDLAD SSHDHTTGGP AIRSVCMRDM GTEMTPIPSQ
301: EPSRSVTPVG ATTPLRSPTS SLPSTPRGGQ PEESSMSKNT RRELSEEEEK AKTRREIVAL GVQLGKMNIA AWASKEEEEN KKNNGDAEEA QKIEFEKRAT
401: AWEEAEKSKH NARYKREEIR IQAWESQEKA KLEAEMRRIE AKVEQMKAEA EAKIMKKIAL AKQRSEEKRA LAEARKTRDA EKAVAEAQYI RETGRIPASS
501: YKICCGWFS
Arabidopsis Description
Remorin family protein [Source:UniProtKB/TrEMBL;Acc:Q9C8G3]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.