Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G485700.1 | Wheat | nucleus, plastid | 96.6 | 96.78 |
| TraesCS2A01G464000.1 | Wheat | nucleus, plastid | 96.22 | 96.77 |
| HORVU2Hr1G103570.7 | Barley | nucleus, plastid | 93.01 | 92.83 |
| Os04t0620200-01 | Rice | nucleus, plastid | 76.75 | 76.32 |
| EES11442 | Sorghum | nucleus, plastid | 74.48 | 73.92 |
| Zm00001d002274_P001 | Maize | nucleus, plastid | 71.83 | 67.26 |
| VIT_10s0003g04090.t01 | Wine grape | nucleus | 43.29 | 43.54 |
| GSMUA_Achr5P26590_001 | Banana | nucleus | 39.51 | 41.06 |
| CDY09599 | Canola | nucleus | 35.35 | 39.29 |
| Bra032380.1-P | Field mustard | nucleus | 35.73 | 38.97 |
| PGSC0003DMT400031464 | Potato | nucleus | 38.19 | 38.92 |
| KRH58701 | Soybean | nucleus | 39.7 | 38.89 |
| CDY26269 | Canola | nucleus | 35.54 | 38.76 |
| AT1G30320.1 | Thale cress | nucleus, plastid | 37.24 | 38.7 |
| KRH42599 | Soybean | nucleus | 39.32 | 38.52 |
| CDX90244 | Canola | nucleus | 36.29 | 38.4 |
| CDY12047 | Canola | nucleus | 35.92 | 38.0 |
| KRH44798 | Soybean | nucleus | 39.13 | 37.57 |
| Solyc08g045640.2.1 | Tomato | mitochondrion | 34.03 | 36.44 |
| Bra010777.1-P | Field mustard | nucleus | 36.48 | 35.81 |
| TraesCS5D01G047600.3 | Wheat | cytosol | 29.87 | 35.27 |
| TraesCS4D01G343800.1 | Wheat | nucleus | 25.9 | 32.46 |
| TraesCS6D01G053500.1 | Wheat | nucleus | 30.43 | 31.63 |
| TraesCS4D01G075000.1 | Wheat | nucleus | 20.04 | 30.03 |
| TraesCS2D01G206900.1 | Wheat | cytosol, plastid | 12.67 | 21.68 |
| TraesCS2D01G343900.1 | Wheat | plastid | 15.5 | 19.76 |
| TraesCS7D01G432700.1 | Wheat | nucleus | 9.64 | 18.41 |
| TraesCS5D01G477500.1 | Wheat | nucleus | 10.59 | 18.36 |
| CDY62474 | Canola | nucleus | 29.11 | 17.62 |
| CDY62472 | Canola | nucleus | 29.11 | 17.62 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G464900.1 | EnsemblPlantsGene:TraesCS2D01G464900 | InterPro:Remorin_C | ncoils:Coil | PANTHER:PTHR31471 | PANTHER:PTHR31471:SF17 |
| PFAM:PF03763 | SEG:seg | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr2D:+:571056250..571059080
Molecular Weight (calculated)
57594.5 Da
IEP (calculated)
8.959
GRAVY (calculated)
-0.721
Length
529 amino acids
Sequence
(BLAST)
(BLAST)
001: MEYERIHKPQ AGALSPTKLR MKLLGAHNRV RVISSSSSRT SPSKNAEPSL AHNRLLVCDV LDEVSDSSGA SKCPAAVSNT EVIDKDPAVD RYKVQNTPKS
101: SVHQPAPSNS SMIHPVRTVE EDSNECDSGL DNASTSSFEF HGGEKTAAKN PTAGYFSRQA SSKWNDAEKW IVNKQTVQQN TTTKGASQNQ SAHQVSSAAP
201: RGGGVVPKHH GTFARPIQNM KRFNPASSAS RSILERLSFA SHQPKLVRHA DVCADQGSSA ISDYQKGQAE TDSIAIKPCN DTEAISTVQA VSVRDVGTEM
301: TPIPSQDPSR TGTPLGSVTP TRSPNCSIPS TPVGGRSSAS IGEDNADDGP YFNRKGGMNE MSEDEIRLKA RKEIAALGVQ LGKMNIASWA SKEELELVSA
401: TPSIADLERM KQEYATRAAA FEDAENSKHT ARFKKEELKI EAWESRQRTK VESEMKRLEE RAEKMRSEAM ARMAERLELA RRVAEEKRAS ANAKMNKQAA
501: RAVQKADLIR QTGRIPGSRI LCCGCFCEP
101: SVHQPAPSNS SMIHPVRTVE EDSNECDSGL DNASTSSFEF HGGEKTAAKN PTAGYFSRQA SSKWNDAEKW IVNKQTVQQN TTTKGASQNQ SAHQVSSAAP
201: RGGGVVPKHH GTFARPIQNM KRFNPASSAS RSILERLSFA SHQPKLVRHA DVCADQGSSA ISDYQKGQAE TDSIAIKPCN DTEAISTVQA VSVRDVGTEM
301: TPIPSQDPSR TGTPLGSVTP TRSPNCSIPS TPVGGRSSAS IGEDNADDGP YFNRKGGMNE MSEDEIRLKA RKEIAALGVQ LGKMNIASWA SKEELELVSA
401: TPSIADLERM KQEYATRAAA FEDAENSKHT ARFKKEELKI EAWESRQRTK VESEMKRLEE RAEKMRSEAM ARMAERLELA RRVAEEKRAS ANAKMNKQAA
501: RAVQKADLIR QTGRIPGSRI LCCGCFCEP
001: MDYERIQKVQ KSIISPTKLR MKLMGPLNNM KREGSKSNSN SSRTSPSRLQ IPDDSEFSKN SLLASNSYSD DDVAATTTDI EVAKLPNEPV LYPTENDNQG
101: SKDRCEGVVP RENDQPRLQQ FRKGDLNMAS PHIMRPQEDE NLDYDSNASS SSFEFHRARG ERSNQNHGSR GYPSRQMPSK WNDAEKWIMS RQNMVMRKNG
201: QGNRIPVRIV PDNAGYEHNK SRMDLCQSSQ VDGFEKFPNV VPSAPHPILT QEYGGDSLID QSTQSNDLAD SSHDHTTGGP AIRSVCMRDM GTEMTPIPSQ
301: EPSRSVTPVG ATTPLRSPTS SLPSTPRGGQ PEESSMSKNT RRELSEEEEK AKTRREIVAL GVQLGKMNIA AWASKEEEEN KKNNGDAEEA QKIEFEKRAT
401: AWEEAEKSKH NARYKREEIR IQAWESQEKA KLEAEMRRIE AKVEQMKAEA EAKIMKKIAL AKQRSEEKRA LAEARKTRDA EKAVAEAQYI RETGRIPASS
501: YKICCGWFS
101: SKDRCEGVVP RENDQPRLQQ FRKGDLNMAS PHIMRPQEDE NLDYDSNASS SSFEFHRARG ERSNQNHGSR GYPSRQMPSK WNDAEKWIMS RQNMVMRKNG
201: QGNRIPVRIV PDNAGYEHNK SRMDLCQSSQ VDGFEKFPNV VPSAPHPILT QEYGGDSLID QSTQSNDLAD SSHDHTTGGP AIRSVCMRDM GTEMTPIPSQ
301: EPSRSVTPVG ATTPLRSPTS SLPSTPRGGQ PEESSMSKNT RRELSEEEEK AKTRREIVAL GVQLGKMNIA AWASKEEEEN KKNNGDAEEA QKIEFEKRAT
401: AWEEAEKSKH NARYKREEIR IQAWESQEKA KLEAEMRRIE AKVEQMKAEA EAKIMKKIAL AKQRSEEKRA LAEARKTRDA EKAVAEAQYI RETGRIPASS
501: YKICCGWFS
Arabidopsis Description
Remorin family protein [Source:UniProtKB/TrEMBL;Acc:Q9C8G3]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.