Factsheet for HORVU0Hr1G040310.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
TargetP:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G046400.1	Wheat	nucleus	94.36	95.47
TraesCS6D01G053500.1	Wheat	nucleus	94.16	95.09
TraesCS6B01G062500.1	Wheat	nucleus	93.58	94.69
Os02t0116800-01	Rice	nucleus	82.3	82.94
EES06158	Sorghum	nucleus, plastid	78.99	71.23
Zm00001d054034_P001	Maize	nucleus	74.51	69.51
GSMUA_Achr5P11780_001	Banana	cytosol	37.55	59.75
GSMUA_Achr11P...	Banana	nucleus	56.03	58.66
GSMUA_Achr1P02030_001	Banana	nucleus	54.47	57.14
VIT_01s0010g01760.t01	Wine grape	nucleus	55.45	55.88
CDY09386	Canola	nucleus	43.39	55.61
Bra026612.1-P	Field mustard	nucleus	43.77	54.22
CDY15819	Canola	nucleus	45.91	53.39
CDY17607	Canola	nucleus	46.11	53.38
GSMUA_Achr2P10980_001	Banana	nucleus	43.39	52.97
KRH58560	Soybean	nucleus	51.75	52.47
KRH42459	Soybean	nucleus	51.95	52.35
Bra024828.1-P	Field mustard	nucleus	45.72	52.22
CDY03066	Canola	nucleus	40.66	51.86
AT2G02170.2	Thale cress	nucleus	47.86	50.62
Solyc01g008180.2.1	Tomato	nucleus	50.97	50.19
GSMUA_Achr5P19220_001	Banana	nucleus	39.3	47.75
HORVU4Hr1G085140.6	Barley	nucleus, plastid	39.3	41.82
HORVU4Hr1G012760.3	Barley	nucleus	23.54	34.47
HORVU2Hr1G103570.7	Barley	nucleus, plastid	30.74	29.81
HORVU5Hr1G009780.6	Barley	cytosol	26.65	28.31
HORVU2Hr1G039030.1	Barley	cytosol, nucleus	13.62	27.56
HORVU7Hr1G100790.1	Barley	nucleus	12.84	23.74
HORVU2Hr1G084090.2	Barley	plastid	18.68	22.97
HORVU5Hr1G111120.3	Barley	cytosol	13.04	21.61
HORVU5Hr1G111130.2	Barley	cytosol, nucleus	13.81	21.01

Protein Annotations

EnsemblPlants:HORVU0Hr1G040310.2	EnsemblPlantsGene:HORVU0Hr1G040310	InterPro:Remorin_C	ncoils:Coil	PANTHER:PTHR31471	PANTHER:PTHR31471:SF1
PFAM:PF03763	SEG:seg	UniParc:UPI000B469963	UniProt:A0A287EDX8	MapMan:35.2	:

Description

No Description!

Coordinates

chrchrUn:+:249636844..249641694

Molecular Weight (calculated)

56489.9 Da

IEP (calculated)

6.932

GRAVY (calculated)

-0.840

Length

514 amino acids

Sequence
(BLAST)

001: LLRRAAMDYE RIEKPSFPTQ GGGFSPKRLR AMLLGVERRR KDDGVEGRQQ EEEEEEEYGA VPMASVRSDD DARRGGSVCE EYKDVDVVST MSGSSSSLDT
101: GSGHRSRDSH SMGSRFRVPE EDSCDSESVA SNFEFHKERG ASARSAPTAV VAPFSKPPPS KWDDAQKWIA SPATNRPGRA GGAFPRKMEK TGFGGGRLPP
201: TKVVLEAMEE IDTKRIDSSQ EKREIGWQKA ANWATPEPYP EVEPCAKSAP GAESTIIDSA VTLSCDSSTT LHSATACIPP PPTGRSVSMR DMGTEMTPIA
301: SQEPSRTGTP VRATSPDCSR PTTPRRTLGI NAAGGVINRG ECSNADLSEE ELQMKTRREI MLLGTQLGKT SIAAWASKKE EEKDASLSLK TVSSDQSAQN
401: ATEIRAAAWE EAEKAKYLAR FKREEIKIHA WEDHQKAKIE AEMRKIEVEV ERMRARAQDK LMSKLASTRH TADEQRAAAE SKRDQSAART AEQAEHIRRT
501: GRMPPSLGCW NWCS

Best Arabidopsis Sequence Match ( AT2G02170.4 )
(BLAST)

001: MDYERIGKTQ VTSSGGGFSP GKLRSMLLLG VDRKKNEEEE STPTMRSGSN QIDDPRVYVA SGLDDCKDVD VVSEITDCST SGIARSISLG LQEYSDYDNV
101: NEIKSVSASS VFEFQKTEKE KVNQRMPIRS FSKPAPSKWD DAQKWIASPT ANRPKTGQVQ VPGSKKGPSF GRQSSMKIVE VAEHRVVEEP DTKRIDVSQV
201: KKDMGNKFGS WEVDSYTTVD SYVKPVLMVE NSIVESATEV NLSRHDSSVA TAFAQPPSTA RSVSMRDMGT EMTPIASQEP SRNGTPIRAT TPIRSPISSE
301: PSSPGRQASA SPMSNKELSE KELQMKTRRE IMVLGTQLGK FNIAAWASKE DEDKDASTSL KTKASLQTSK SVSEARATAW EEAEKAKHMA RFRREEMKIQ
401: AWENHQKAKS EAEMKKTEVK VERIKGRAQD RLMKKLATIE RKAEEKRAAA EAKKDHQAAK TEKQAEQIRR TGKVPSLLFS CFSFCS

Arabidopsis Description

At2g02170/F5O4.6 [Source:UniProtKB/TrEMBL;Acc:Q9ZUM1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.