Factsheet for Bra039695.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra040561.1-P	Field mustard	cytosol	34.81	99.58
CDY36609	Canola	cytosol	92.77	97.82
CDY24070	Canola	extracellular	99.26	91.94
Bra040560.1-P	Field mustard	nucleus	49.41	79.95
AT1G53860.1	Thale cress	nucleus	47.35	72.62
PGSC0003DMT400023636	Potato	nucleus	19.47	56.41
VIT_09s0002g00360.t01	Wine grape	nucleus	29.5	43.86
Solyc03g123590.2.1	Tomato	nucleus	27.88	40.56
GSMUA_Achr10P...	Banana	nucleus	26.55	40.0
TraesCS2B01G363600.1	Wheat	plastid	24.34	39.95
TraesCS2D01G343900.1	Wheat	plastid	24.34	39.76
HORVU2Hr1G084090.2	Barley	plastid	24.34	39.47
KRH47718	Soybean	nucleus	27.14	39.23
KRH06283	Soybean	cytosol	27.14	38.9
GSMUA_Achr2P07310_001	Banana	nucleus	28.02	38.15
Os11t0616300-01	Rice	nucleus	27.43	37.73
Zm00001d048829_P001	Maize	plastid	23.45	34.57
EES10116	Sorghum	nucleus, plastid	24.78	32.88
Bra033989.1-P	Field mustard	cytosol	12.98	24.79
Bra026612.1-P	Field mustard	nucleus	14.01	22.89
Bra004237.1-P	Field mustard	nucleus	10.32	22.01
Bra024828.1-P	Field mustard	nucleus	13.86	20.89
Bra032380.1-P	Field mustard	nucleus	14.45	20.21
Bra004657.1-P	Field mustard	cytosol	7.23	18.15
Bra010777.1-P	Field mustard	nucleus	13.57	17.07
Bra007335.1-P	Field mustard	nucleus	6.34	14.68

Protein Annotations

MapMan:19.2.6.1.1.5	Gene3D:3.60.20.10	EnsemblPlantsGene:Bra039695	EnsemblPlants:Bra039695.1	EnsemblPlants:Bra039695.1-P	ncoils:Coil
GO:GO:0000502	GO:GO:0003674	GO:GO:0003824	GO:GO:0004175	GO:GO:0004298	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005839	GO:GO:0006508
GO:GO:0006511	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0009056	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	GO:GO:0019773	GO:GO:0043161	GO:GO:0051603	InterPro:IPR023332
InterPro:IPR029055	UniProt:M4FF23	InterPro:Ntn_hydrolases_N	PFAM:PF00227	PFAM:PF03763	PFAM:PF10584
ScanProsite:PS00388	PFscan:PS51475	PANTHER:PTHR31471	PANTHER:PTHR31471:SF3	InterPro:Proteasome_alpha-type	InterPro:Proteasome_alpha_type_5
InterPro:Proteasome_asu_N	InterPro:Proteasome_sua/b	InterPro:Remorin_C	SMART:SM00948	SUPFAM:SSF56235	UniParc:UPI000253E779
SEG:seg	:	:	:	:	:

Description

AT1G53850 (E=2e-128) PAE1 | PAE1; endopeptidase/ peptidase/ threonine-type endopeptidase

Coordinates

chrA06:+:497461..502236

Molecular Weight (calculated)

76430.1 Da

IEP (calculated)

6.795

GRAVY (calculated)

-0.606

Length

678 amino acids

Sequence
(BLAST)

001: MDITRNNITK LHLQTQSLFP PNMERTLDVE PRMGTNPFAE DFIKSLPISS NQSSNSSSSE MVNERRQSFS TQKSIGEGRS SGQRRVMLME SPCTPGRGVF
101: SFSSSLSGRR RRNFPSKWDD AEKWVTSSHE SPAHSLKNHH ILKDKLASEV PSTEGFIFRD LEEEEEEAQV QHRDMGTEMT PVGSVTTSRC HTPFESTSPA
201: RHNTPSNMSG PLTETKNVID ISEFANKLRL SGSAATQYYN SVTSHWNSRE EEEEEISKSL RHSDMESELQ RSVSVTVWDD EDDKIKFCQR YQREEAKIKA
301: WVNLQDAKAE AQSRKLEVKI QKMRSNFEEK MMKRMDTVHR RAEDWRATAR QQHAEQLKRA AETARKLSNR RGYLVAGRSS CGCLPSIPVS SNSPINQLTL
401: TRFYRSKSKK KMFLTRSVYQ SVILCLWVHL NVRPFCVSIP ILLLRRTEYD RGVNTFSPEG RLFQVEYAIE AIKLGSTAIG VKTKEGVVLA VEKRITSPLL
501: EPSSVEKIME IDDHIGCAMS GLIADARTLV EHARVETQNH RFSYGEPMTV ESTTQALCDL ALRFGEGDEE SMSRPFGVSL LIAGHDENGP SLYYTDPSGT
601: FWQCNAKAIG SGSEGADSSL QEQFNKDLSL SEAETIAVSI LKQVMEEKVT PNNVDIAKVA PAYHLYTPEE VEAVISRL

Best Arabidopsis Sequence Match ( AT1G53860.1 )
(BLAST)

001: MDFTRNSNTK LHPQTQLLFP PNMEKNSNVS ANPFAEDSLT SRINLKETTD FIKSLPISSN QSSSSSNEMV NERRPSFSSQ KSIGEGRSNG QRRLMLMESP
101: CTPGRGVFSF SSNVSGRRRN FPSKWIDAEK WVTSSGHDSP AHSLKNNQFD GFKHQVEVVY SEKSRVTEEC FHGSVSLSPQ DLILKDKLAN EVPQILPSTE
201: GFIFKDSDKF LRYEEAQVQH RDMGTEMTPI GSVTTSRCHT PFKSSSPARH NTPSQLSGPL TETKNVIDIS EFEDKLRLSG SSTSQYCYSV TSHWNSREEE
301: EEEISKSLRH FDMESELRRS VSESKAPLWD DEDDKIKFCQ RYQREEAKIQ AWVNLENAKA EAQSRKLEVK IQKMRSNLEE KLMKRMDMVH RRAEDWRATA
401: RQQHVEQMQK AAETARKLTN RRGYLVTGRS SCGCLPCNNT CH

Arabidopsis Description

At1g53860 [Source:UniProtKB/TrEMBL;Acc:Q6DBE3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.