Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- peroxisome 3
- cytosol 2
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Bra039695.1-P | Field mustard | cytosol | 99.58 | 34.81 |
Bra004237.1-P | Field mustard | nucleus | 2.53 | 1.89 |
Bra033989.1-P | Field mustard | cytosol | 2.53 | 1.69 |
Os11t0616300-01 | Rice | nucleus | 2.53 | 1.22 |
TraesCS2B01G363600.1 | Wheat | plastid | 2.11 | 1.21 |
TraesCS2D01G343900.1 | Wheat | plastid | 2.11 | 1.2 |
EES10116 | Sorghum | nucleus, plastid | 2.53 | 1.17 |
Bra032380.1-P | Field mustard | nucleus | 2.11 | 1.03 |
HORVU2Hr1G084090.2 | Barley | plastid | 1.69 | 0.96 |
AT1G53860.1 | Thale cress | nucleus | 1.69 | 0.9 |
VIT_09s0002g00360.t01 | Wine grape | nucleus | 1.69 | 0.88 |
Zm00001d048829_P001 | Maize | plastid | 1.69 | 0.87 |
PGSC0003DMT400023636 | Potato | nucleus | 0.84 | 0.85 |
KRH47718 | Soybean | nucleus | 1.69 | 0.85 |
KRH06283 | Soybean | cytosol | 1.69 | 0.85 |
Bra010777.1-P | Field mustard | nucleus | 1.69 | 0.74 |
Bra004657.1-P | Field mustard | cytosol | 0.84 | 0.74 |
CDY08209 | Canola | nucleus | 1.27 | 0.72 |
Bra040560.1-P | Field mustard | nucleus | 1.27 | 0.72 |
GSMUA_Achr2P07310_001 | Banana | nucleus | 1.27 | 0.6 |
Bra026612.1-P | Field mustard | nucleus | 0.84 | 0.48 |
GSMUA_Achr10P... | Banana | nucleus | 0.84 | 0.44 |
Bra024828.1-P | Field mustard | nucleus | 0.84 | 0.44 |
Solyc03g123590.2.1 | Tomato | nucleus | 0.84 | 0.43 |
Bra007335.1-P | Field mustard | nucleus | 0.42 | 0.34 |
Protein Annotations
MapMan:19.2.6.1.1.5 | Gene3D:3.60.20.10 | EnsemblPlantsGene:Bra040561 | EnsemblPlants:Bra040561.1 | EnsemblPlants:Bra040561.1-P | GO:GO:0000502 |
GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004175 | GO:GO:0004298 | GO:GO:0005575 | GO:GO:0005622 |
GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005839 | GO:GO:0006508 | GO:GO:0006511 |
GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008233 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016787 |
GO:GO:0019538 | GO:GO:0019773 | GO:GO:0043161 | GO:GO:0051603 | InterPro:IPR023332 | InterPro:IPR029055 |
UniProt:M4FHI3 | InterPro:Ntn_hydrolases_N | PFAM:PF00227 | PFAM:PF10584 | ScanProsite:PS00388 | PFscan:PS51475 |
PANTHER:PTHR11599 | PANTHER:PTHR11599:SF14 | InterPro:Proteasome_alpha-type | InterPro:Proteasome_alpha_type_5 | InterPro:Proteasome_asu_N | InterPro:Proteasome_sua/b |
SMART:SM00948 | SUPFAM:SSF56235 | UniParc:UPI000253EE15 | : | : | : |
Description
AT1G53850 (E=5e-131) PAE1 | PAE1; endopeptidase/ peptidase/ threonine-type endopeptidase
Coordinates
chrScaffold000218:+:32250..33798
Molecular Weight (calculated)
25909.6 Da
IEP (calculated)
4.405
GRAVY (calculated)
-0.200
Length
237 amino acids
Sequence
(BLAST)
(BLAST)
001: MFLTRTEYDR GVNTFSPEGR LFQVEYAIEA IKLGSTAIGV KTKEGVVLAV EKRITSPLLE PSSVEKIMEI DDHIGCAMSG LIADARTLVE HARVETQNHR
101: FSYGEPMTVE STTQALCDLA LRFGEGDEES MSRPFGVSLL IAGHDENGPS LYYTDPSGTF WQCNAKAIGS GSEGADSSLQ EQFNKDLSLS EAETIAVSIL
201: KQVMEEKVTP NNVDIAKVAP AYHLYTPQEV EAVISRL
101: FSYGEPMTVE STTQALCDLA LRFGEGDEES MSRPFGVSLL IAGHDENGPS LYYTDPSGTF WQCNAKAIGS GSEGADSSLQ EQFNKDLSLS EAETIAVSIL
201: KQVMEEKVTP NNVDIAKVAP AYHLYTPQEV EAVISRL
001: MFLTRTEYDR GVNTFSPEGR LFQVEYAIEA IKLGSTAIGV KTKEGVVLAV EKRITSPLLE PSSVEKIMEI DDHIGCAMSG LIADARTLVE HARVETQNHR
101: FSYGEPMTVE STTQALCDLA LRFGEGEEES MSRPFGVSLL IAGHDENGPS LYYTDPSGTF WQCNAKAIGS GSEGADSSLQ EQFNKDLSLQ EAETIAVSIL
201: KQVMEEKVTP NNVDIAKVAP AYHLYTPQEV EAVIARL
101: FSYGEPMTVE STTQALCDLA LRFGEGEEES MSRPFGVSLL IAGHDENGPS LYYTDPSGTF WQCNAKAIGS GSEGADSSLQ EQFNKDLSLQ EAETIAVSIL
201: KQVMEEKVTP NNVDIAKVAP AYHLYTPQEV EAVIARL
Arabidopsis Description
PAE1Proteasome subunit alpha type-5-A [Source:UniProtKB/Swiss-Prot;Acc:O81149]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.