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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • mitochondrion 1
  • peroxisome 3
  • cytosol 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra039695.1-P Field mustard cytosol 99.58 34.81
Bra004237.1-P Field mustard nucleus 2.53 1.89
Bra033989.1-P Field mustard cytosol 2.53 1.69
Os11t0616300-01 Rice nucleus 2.53 1.22
TraesCS2B01G363600.1 Wheat plastid 2.11 1.21
TraesCS2D01G343900.1 Wheat plastid 2.11 1.2
EES10116 Sorghum nucleus, plastid 2.53 1.17
Bra032380.1-P Field mustard nucleus 2.11 1.03
HORVU2Hr1G084090.2 Barley plastid 1.69 0.96
AT1G53860.1 Thale cress nucleus 1.69 0.9
VIT_09s0002g00360.t01 Wine grape nucleus 1.69 0.88
Zm00001d048829_P001 Maize plastid 1.69 0.87
PGSC0003DMT400023636 Potato nucleus 0.84 0.85
KRH47718 Soybean nucleus 1.69 0.85
KRH06283 Soybean cytosol 1.69 0.85
Bra010777.1-P Field mustard nucleus 1.69 0.74
Bra004657.1-P Field mustard cytosol 0.84 0.74
CDY08209 Canola nucleus 1.27 0.72
Bra040560.1-P Field mustard nucleus 1.27 0.72
GSMUA_Achr2P07310_001 Banana nucleus 1.27 0.6
Bra026612.1-P Field mustard nucleus 0.84 0.48
GSMUA_Achr10P... Banana nucleus 0.84 0.44
Bra024828.1-P Field mustard nucleus 0.84 0.44
Solyc03g123590.2.1 Tomato nucleus 0.84 0.43
Bra007335.1-P Field mustard nucleus 0.42 0.34
Protein Annotations
MapMan:19.2.6.1.1.5Gene3D:3.60.20.10EnsemblPlantsGene:Bra040561EnsemblPlants:Bra040561.1EnsemblPlants:Bra040561.1-PGO:GO:0000502
GO:GO:0003674GO:GO:0003824GO:GO:0004175GO:GO:0004298GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005634GO:GO:0005737GO:GO:0005839GO:GO:0006508GO:GO:0006511
GO:GO:0008150GO:GO:0008152GO:GO:0008233GO:GO:0009056GO:GO:0009987GO:GO:0016787
GO:GO:0019538GO:GO:0019773GO:GO:0043161GO:GO:0051603InterPro:IPR023332InterPro:IPR029055
UniProt:M4FHI3InterPro:Ntn_hydrolases_NPFAM:PF00227PFAM:PF10584ScanProsite:PS00388PFscan:PS51475
PANTHER:PTHR11599PANTHER:PTHR11599:SF14InterPro:Proteasome_alpha-typeInterPro:Proteasome_alpha_type_5InterPro:Proteasome_asu_NInterPro:Proteasome_sua/b
SMART:SM00948SUPFAM:SSF56235UniParc:UPI000253EE15:::
Description
AT1G53850 (E=5e-131) PAE1 | PAE1; endopeptidase/ peptidase/ threonine-type endopeptidase
Coordinates
chrScaffold000218:+:32250..33798
Molecular Weight (calculated)
25909.6 Da
IEP (calculated)
4.405
GRAVY (calculated)
-0.200
Length
237 amino acids
Sequence
(BLAST)
001: MFLTRTEYDR GVNTFSPEGR LFQVEYAIEA IKLGSTAIGV KTKEGVVLAV EKRITSPLLE PSSVEKIMEI DDHIGCAMSG LIADARTLVE HARVETQNHR
101: FSYGEPMTVE STTQALCDLA LRFGEGDEES MSRPFGVSLL IAGHDENGPS LYYTDPSGTF WQCNAKAIGS GSEGADSSLQ EQFNKDLSLS EAETIAVSIL
201: KQVMEEKVTP NNVDIAKVAP AYHLYTPQEV EAVISRL
Best Arabidopsis Sequence Match ( AT1G53850.1 )
(BLAST)
001: MFLTRTEYDR GVNTFSPEGR LFQVEYAIEA IKLGSTAIGV KTKEGVVLAV EKRITSPLLE PSSVEKIMEI DDHIGCAMSG LIADARTLVE HARVETQNHR
101: FSYGEPMTVE STTQALCDLA LRFGEGEEES MSRPFGVSLL IAGHDENGPS LYYTDPSGTF WQCNAKAIGS GSEGADSSLQ EQFNKDLSLQ EAETIAVSIL
201: KQVMEEKVTP NNVDIAKVAP AYHLYTPQEV EAVIARL
Arabidopsis Description
PAE1Proteasome subunit alpha type-5-A [Source:UniProtKB/Swiss-Prot;Acc:O81149]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.