Factsheet for AT1G48450.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra032255.1-P	Field mustard	plastid	78.72	81.82
CDY23684	Canola	plastid	78.72	81.82
CDY58279	Canola	plastid	80.38	80.0
AT3G17800.2	Thale cress	plastid	65.96	65.34
Solyc03g098000.2.1	Tomato	plastid	56.5	61.92
VIT_17s0119g00070.t01	Wine grape	plastid	59.81	60.38
GSMUA_Achr1P22120_001	Banana	plastid	54.37	59.9
PGSC0003DMT400083980	Potato	plastid	58.87	59.14
KRH60570	Soybean	plastid	55.32	58.5
KRH39016	Soybean	plastid	56.74	57.97
KRH48705	Soybean	plastid	55.56	57.6
KRH41876	Soybean	plastid	54.61	57.18
GSMUA_Achr8P30820_001	Banana	mitochondrion	55.56	56.49
KXG37708	Sorghum	plastid	55.08	56.14
HORVU4Hr1G008300.1	Barley	plastid	52.72	54.66
TraesCS4B01G050500.1	Wheat	plastid	52.48	54.28
Zm00001d013411_P002	Maize	plastid	53.19	54.09
TraesCS4A01G264500.1	Wheat	plastid	52.48	53.75
Zm00001d033787_P001	Maize	plastid	53.66	53.66
TraesCS4D01G050700.1	Wheat	plastid	52.01	53.66
VIT_15s0024g00690.t01	Wine grape	plastid	49.88	51.34
Os03t0717900-01	Rice	cytosol	53.19	49.45
AT1G32160.1	Thale cress	nucleus, plastid	35.7	37.19
AT5G48590.1	Thale cress	plastid	26.95	33.14
AT3G07310.1	Thale cress	plastid	28.37	32.61

Protein Annotations

MapMan:35.1	EntrezGene:841266	ProteinID:AAF79715.1	ProteinID:AEE32293.1	ArrayExpress:AT1G48450	EnsemblPlantsGene:AT1G48450
RefSeq:AT1G48450	TAIR:AT1G48450	RefSeq:AT1G48450-TAIR-G	EnsemblPlants:AT1G48450.1	TAIR:AT1G48450.1	EMBL:AY065051
Unigene:At.27162	InterPro:At3g17800-like	EMBL:BT000942	InterPro:DUF760	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0016874	RefSeq:NP_175278.1	PFAM:PF05542	PO:PO:0000013	PO:PO:0000037
PO:PO:0000084	PO:PO:0000230	PO:PO:0000293	PO:PO:0001016	PO:PO:0001017	PO:PO:0001054
PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095
PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616
PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025
PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047
PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022
PO:PO:0025195	PO:PO:0025281	PANTHER:PTHR31808	PANTHER:PTHR31808:SF4	UniProt:Q9LP80	UniParc:UPI00000AC5B2

Description

Alanine-tRNA ligase, putative (DUF760) [Source:UniProtKB/TrEMBL;Acc:Q9LP80]

Coordinates

chr1:-:17908503..17910473

Molecular Weight (calculated)

47192.0 Da

IEP (calculated)

6.135

GRAVY (calculated)

-0.312

Length

423 amino acids

Sequence
(BLAST)

001: MDAVAANLFQ SPSLLRQTSE RLIFSTPNCP GFMRISSGPQ FRLRQNSSLK FSRPFQSGTT CVKSRRSFVV KASASGDAST ESIAPLQLKS PVGQFLSQIL
101: VSHPHLVPAA VEQQLEQLQI DRDAEEQSKD ASSVLGTDIV LYRRIAEVKE KERRRALEEI LYALVVQKFM DANVTLVPSI TSSSADPSGR VDTWPTLDGE
201: LERLHSPEVY EMIQNHLSII LKNRTDDLTA VAQISKLGVG QVYAASVMYG YFLKRIDQRF QLEKTMRILP GGSDEGETSI EQAGRDVERN FYEEAEETYQ
301: AVSSNQDVGS FVGGINASGG FSSDMKQSRL KTYVMSFDGE TLQRYATIRS RESVGIIEKH TEALFGRPEI VITPQGTIDS SKDEHIKISF KGLKRLVLEA
401: VTFGSFLWDV ESHVDSRYHF VLN

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.