Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G48450.1 | KRH33290 | AT2G41680.1 | 21798944 |
| AT1G48450.1 | KRH72015 | AT2G41680.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH41876 | Soybean | plastid | 88.5 | 87.62 |
| KRH48705 | Soybean | plastid | 66.0 | 64.71 |
| KRH39016 | Soybean | plastid | 66.25 | 64.01 |
| Solyc03g098000.2.1 | Tomato | plastid | 59.5 | 61.66 |
| CDX82345 | Canola | plastid | 62.0 | 61.08 |
| GSMUA_Achr1P22120_001 | Banana | plastid | 58.5 | 60.94 |
| VIT_17s0119g00070.t01 | Wine grape | plastid | 63.75 | 60.86 |
| Bra001683.1-P | Field mustard | plastid | 61.5 | 60.29 |
| CDX75937 | Canola | plastid | 61.75 | 59.66 |
| CDY19857 | Canola | nucleus | 15.5 | 59.62 |
| CDX95820 | Canola | plastid | 61.0 | 58.8 |
| PGSC0003DMT400083980 | Potato | plastid | 61.75 | 58.67 |
| CDX92162 | Canola | plastid | 60.75 | 58.55 |
| Bra022245.1-P | Field mustard | plastid | 60.75 | 58.55 |
| CDY23684 | Canola | plastid | 58.75 | 57.74 |
| Bra032255.1-P | Field mustard | plastid | 58.75 | 57.74 |
| AT3G17800.2 | Thale cress | plastid | 61.25 | 57.38 |
| GSMUA_Achr8P30820_001 | Banana | mitochondrion | 58.25 | 56.01 |
| CDY58279 | Canola | plastid | 59.5 | 56.0 |
| AT1G48450.1 | Thale cress | plastid | 58.5 | 55.32 |
| HORVU4Hr1G008300.1 | Barley | plastid | 56.25 | 55.15 |
| TraesCS4B01G050500.1 | Wheat | plastid | 56.0 | 54.77 |
| KXG37708 | Sorghum | plastid | 56.75 | 54.7 |
| TraesCS4D01G050700.1 | Wheat | plastid | 56.0 | 54.63 |
| TraesCS4A01G264500.1 | Wheat | plastid | 55.5 | 53.75 |
| Zm00001d033787_P001 | Maize | plastid | 56.0 | 52.96 |
| Zm00001d013411_P002 | Maize | plastid | 55.0 | 52.88 |
| VIT_15s0024g00690.t01 | Wine grape | plastid | 53.75 | 52.31 |
| Os03t0717900-01 | Rice | cytosol | 56.25 | 49.45 |
| KRH74317 | Soybean | endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 43.0 | 42.36 |
| KRH39607 | Soybean | golgi | 42.5 | 41.67 |
| KRH07429 | Soybean | plastid | 27.25 | 28.09 |
| KRG99623 | Soybean | plastid | 26.0 | 27.96 |
| KRH46625 | Soybean | plastid | 25.75 | 27.18 |
| KRH66142 | Soybean | plastid | 26.5 | 26.97 |
Protein Annotations
| EMBL:ACUP02003368 | EnsemblPlants:KRH60570 | EnsemblPlantsGene:GLYMA_05G247700 | EntrezGene:100817892 | InterPro:At3g17800-like | InterPro:DUF760 |
| PANTHER:PTHR31808 | PANTHER:PTHR31808:SF4 | PFAM:PF05542 | ProteinID:KRH60570 | ProteinID:KRH60570.1 | UniParc:UPI00023C4473 |
| UniProt:I1K5A0 | MapMan:35.1 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr5:-:42098128..42099813
Molecular Weight (calculated)
44530.1 Da
IEP (calculated)
6.689
GRAVY (calculated)
-0.266
Length
400 amino acids
Sequence
(BLAST)
(BLAST)
001: MDVAVTAVRS PLIVLGSPVN GSASARLGST FGFSRKQLCL NSVFIPKQVR RRGFVVRAAS SSPEWDDAKI APLQLESPIG QFLSQILKDH PHLVPAAVDQ
101: QLHQLQTDRD AHLQNQQQPS SPTDLVLYRR IAEVKANERR KALEEILYAL VVQKFMDANI SLIPSVTPDL SGKVDLWPNE DGKLEQLHSD EAYEMIQNHL
201: SLILGNKAGD LTSVAEISKF RVGQVYAASV MYGYFLKRVD QRFQLEKTMK VLPNATEEEN GVHRNTMDNA RPSIEQDTSQ VMSHPEVSAW PGGDVSPGGF
301: GYGIKATRLR NYVMSFDGDT LQRYAAIRSK EAVSIIEKHT EALFGRPEIV VTPEGAVSKD ENIKISFGGL KKLVLEAVTF GSFLWDVESY VDSRYHFVFN
101: QLHQLQTDRD AHLQNQQQPS SPTDLVLYRR IAEVKANERR KALEEILYAL VVQKFMDANI SLIPSVTPDL SGKVDLWPNE DGKLEQLHSD EAYEMIQNHL
201: SLILGNKAGD LTSVAEISKF RVGQVYAASV MYGYFLKRVD QRFQLEKTMK VLPNATEEEN GVHRNTMDNA RPSIEQDTSQ VMSHPEVSAW PGGDVSPGGF
301: GYGIKATRLR NYVMSFDGDT LQRYAAIRSK EAVSIIEKHT EALFGRPEIV VTPEGAVSKD ENIKISFGGL KKLVLEAVTF GSFLWDVESY VDSRYHFVFN
001: MDALTSSLVR SPIVPSRTSD NGSGSMFLTA SGPGFTRSGS SRLQLRLRQN ASARSSRSLQ SLTTTAKTRR SFVVRASSAS NDASSGSSPK PIAPLQLQSP
101: AGQFLSQILV SHPHLVPAAV EQQLEQLQTD RDSQGQNKDS ASVPGTDIVL YRRIAELKEN ERRRTLEEIL YALVVQKFME ANVSLVPSVS PSSDPSGRVD
201: TWPTKVEKLE RLHSPEMYEM IHNHLALILG SRMGDLNSVA QISKLRVGQV YAASVMYGYF LKRVDQRFQL EKTMKILPGG SDESKTSVEQ AEGTATYQAA
301: VSSHPEVGAF AGGVSAKGFG SEIKPSRLRS YVMSFDAETL QRYATIRSRE AVGIIEKHTE ALFGKPEIVI TPEGTVDSSK DEQIKISFGG MKRLVLEAVT
401: FGSFLWDVES HVDARYHFVL N
101: AGQFLSQILV SHPHLVPAAV EQQLEQLQTD RDSQGQNKDS ASVPGTDIVL YRRIAELKEN ERRRTLEEIL YALVVQKFME ANVSLVPSVS PSSDPSGRVD
201: TWPTKVEKLE RLHSPEMYEM IHNHLALILG SRMGDLNSVA QISKLRVGQV YAASVMYGYF LKRVDQRFQL EKTMKILPGG SDESKTSVEQ AEGTATYQAA
301: VSSHPEVGAF AGGVSAKGFG SEIKPSRLRS YVMSFDAETL QRYATIRSRE AVGIIEKHTE ALFGKPEIVI TPEGTVDSSK DEQIKISFGG MKRLVLEAVT
401: FGSFLWDVES HVDARYHFVL N
Arabidopsis Description
Protein of unknown function (DUF760) [Source:TAIR;Acc:AT3G17800]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.