Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G20200.1 | Thale cress | cytosol | 91.79 | 91.6 |
| Bra015799.1-P | Field mustard | plastid | 90.14 | 91.08 |
| CDX87648 | Canola | extracellular | 89.94 | 90.87 |
| CDX73215 | Canola | cytosol, nucleus, plastid | 90.76 | 90.02 |
| KRH61001 | Soybean | nucleus | 82.75 | 82.75 |
| KRH51666 | Soybean | nucleus | 82.55 | 82.55 |
| VIT_18s0001g01120.t01 | Wine grape | nucleus | 81.11 | 81.11 |
| KRH17475 | Soybean | nucleus | 79.67 | 79.18 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, plastid | 78.23 | 78.07 |
| KRH05990 | Soybean | cytosol, nucleus, plastid | 78.44 | 77.96 |
| TraesCS4B01G265800.1 | Wheat | plastid | 75.77 | 75.61 |
| TraesCS4D01G265700.1 | Wheat | unclear | 75.56 | 75.41 |
| Os09t0541900-01 | Rice | cytosol, nucleus, plastid | 75.36 | 75.36 |
| Os08t0550100-01 | Rice | plasma membrane | 75.15 | 75.31 |
| TraesCS4B01G265700.1 | Wheat | plastid | 75.15 | 75.0 |
| HORVU4Hr1G071480.8 | Barley | plastid | 76.18 | 74.95 |
| TraesCS4A01G044600.1 | Wheat | golgi | 75.36 | 74.9 |
| EES14113 | Sorghum | cytosol, nucleus, plastid | 75.36 | 73.99 |
| TraesCS5D01G340000.1 | Wheat | cytosol, nucleus, plastid | 74.54 | 73.19 |
| TraesCS5A01G335200.1 | Wheat | golgi | 74.33 | 72.98 |
| HORVU5Hr1G084540.1 | Barley | cytosol, nucleus, plastid | 74.13 | 72.78 |
| Zm00001d053232_P005 | Maize | cytosol, nucleus, plastid | 75.15 | 72.05 |
| Zm00001d032010_P007 | Maize | cytosol, nucleus, plastid | 75.15 | 70.11 |
| GSMUA_Achr5P18970_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 78.64 | 69.64 |
| GSMUA_Achr8P13080_001 | Banana | cytosol, extracellular, plastid | 38.19 | 68.63 |
| GSMUA_Achr8P13090_001 | Banana | cytosol | 34.09 | 68.59 |
| PGSC0003DMT400015775 | Potato | endoplasmic reticulum, golgi, plasma membrane | 61.6 | 61.73 |
| Solyc01g111700.1.1 | Tomato | endoplasmic reticulum, golgi, plasma membrane | 61.19 | 61.57 |
| HORVU7Hr1G080070.2 | Barley | cytosol | 9.45 | 47.92 |
Protein Annotations
| Gene3D:1.25.40.570 | MapMan:19.2.6.2.2.3 | InterPro:26S_Psome_reg_C | EntrezGene:843931 | ProteinID:AAF26768.2 | ProteinID:AEE35783.1 |
| ArrayExpress:AT1G75990 | EnsemblPlantsGene:AT1G75990 | RefSeq:AT1G75990 | TAIR:AT1G75990 | RefSeq:AT1G75990-TAIR-G | EnsemblPlants:AT1G75990.1 |
| TAIR:AT1G75990.1 | EMBL:AY057508 | Unigene:At.15402 | EMBL:BT015771 | ncoils:Coil | GO:GO:0000502 |
| GO:GO:0003674 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 |
| GO:GO:0005886 | GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008541 | GO:GO:0009056 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0019538 | GO:GO:0030163 | GO:GO:0030234 | GO:GO:0042176 |
| GO:GO:0050790 | InterPro:IPR000717 | RefSeq:NP_177726.1 | InterPro:PCI_dom | PFAM:PF01399 | PFAM:PF08375 |
| PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PFscan:PS50250 | PANTHER:PTHR10758 | PANTHER:PTHR10758:SF7 | UniProt:Q9LQR8 | SMART:SM00088 |
| SMART:SM00753 | SUPFAM:SSF46785 | UniParc:UPI0000000E33 | InterPro:WH_DNA-bd_sf | SEG:seg | : |
Description
RPN3B26S proteasome non-ATPase regulatory subunit 3 homolog B [Source:UniProtKB/Swiss-Prot;Acc:Q9LQR8]
Coordinates
chr1:-:28524404..28526848
Molecular Weight (calculated)
55594.5 Da
IEP (calculated)
8.517
GRAVY (calculated)
-0.400
Length
487 amino acids
Sequence
(BLAST)
(BLAST)
001: MTQDVEMKDN QTPTQSVVSA PTSTLQNLKE IAALIDTGSY TKEVRRIARA VRLTVGLRRK LTGSVISSFL DFALVPGSEA HTRLSSFVPK SDEHDMEVDT
101: ASSNSQAPPK HLPAELEIYC YFIVLLFLID QKKYNEAKVC STASIARLKS VNRRTVDVIA SKLYFYYSLS YELTNDLAEI RSTLLALHHS ATLRHDELGQ
201: ETLLNLLLRN YLHYNLYDQA EKLRSKAPRF EAHSNQQFCR YLFYLGKIRT IQLEYTDAKE SLLQAARKAP VASLGFRIQC NKWAIIVRLL LGEIPERSIF
301: TQKGMEKTLR PYFELTNAVR IGDLELFGKI QEKFAKTFAE DRTHNLIVRL RHNVIRTGLR NISISYSRIS LQDVAQKLRL NSANPVADAE SIVAKAIRDG
401: AIDATIDHKN GCMVSKETGD IYSTNEPQTA FNSRIAFCLN MHNEAVRALR FPPNTHREKE SEEKRREMKQ QEEELAKYMA EEDDDDF
101: ASSNSQAPPK HLPAELEIYC YFIVLLFLID QKKYNEAKVC STASIARLKS VNRRTVDVIA SKLYFYYSLS YELTNDLAEI RSTLLALHHS ATLRHDELGQ
201: ETLLNLLLRN YLHYNLYDQA EKLRSKAPRF EAHSNQQFCR YLFYLGKIRT IQLEYTDAKE SLLQAARKAP VASLGFRIQC NKWAIIVRLL LGEIPERSIF
301: TQKGMEKTLR PYFELTNAVR IGDLELFGKI QEKFAKTFAE DRTHNLIVRL RHNVIRTGLR NISISYSRIS LQDVAQKLRL NSANPVADAE SIVAKAIRDG
401: AIDATIDHKN GCMVSKETGD IYSTNEPQTA FNSRIAFCLN MHNEAVRALR FPPNTHREKE SEEKRREMKQ QEEELAKYMA EEDDDDF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.