Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY25631 | Canola | plastid | 94.07 | 94.33 |
| Bra030204.1-P | Field mustard | cytosol | 93.79 | 94.05 |
| CDX89514 | Canola | cytosol | 93.5 | 93.77 |
| PGSC0003DMT400026930 | Potato | plastid | 82.77 | 83.24 |
| Solyc02g063490.2.1 | Tomato | plastid | 82.77 | 83.24 |
| KRH28298 | Soybean | endoplasmic reticulum, nucleus | 79.94 | 80.17 |
| Os12t0632700-01 | Rice | extracellular, nucleus, plastid | 80.23 | 79.78 |
| CDY43430 | Canola | cytosol | 38.7 | 79.19 |
| GSMUA_Achr4P01380_001 | Banana | plasma membrane | 79.38 | 78.93 |
| TraesCS5D01G019700.1 | Wheat | nucleus | 79.38 | 78.49 |
| Zm00001d041243_P001 | Maize | mitochondrion | 79.66 | 78.33 |
| TraesCS5A01G014300.1 | Wheat | nucleus, plastid | 79.1 | 78.21 |
| TraesCS5B01G012400.1 | Wheat | cytosol | 78.81 | 77.93 |
| CDY17513 | Canola | cytosol | 33.9 | 76.92 |
| KRH77189 | Soybean | endoplasmic reticulum | 62.71 | 76.82 |
| KRH48807 | Soybean | mitochondrion | 30.51 | 72.97 |
| AT5G09660.4 | Thale cress | cytosol | 72.03 | 70.25 |
| HORVU5Hr1G002010.1 | Barley | plastid | 79.38 | 68.7 |
| VIT_00s0373g00040.t01 | Wine grape | peroxisome | 84.18 | 68.66 |
| KXG24112 | Sorghum | plastid | 79.94 | 63.45 |
| AT3G15020.1 | Thale cress | mitochondrion | 59.89 | 62.17 |
| AT1G53240.1 | Thale cress | mitochondrion | 59.04 | 61.29 |
| AT3G47520.1 | Thale cress | plastid | 57.91 | 50.87 |
| CDY34030 | Canola | mitochondrion | 35.03 | 44.44 |
| AT3G53910.1 | Thale cress | cytosol | 9.6 | 31.48 |
Protein Annotations
| KEGG:00020+1.1.1.37 | KEGG:00270+1.1.1.37 | KEGG:00620+1.1.1.37 | KEGG:00630+1.1.1.37 | KEGG:00680+1.1.1.37 | KEGG:00710+1.1.1.37 |
| KEGG:00720+1.1.1.37 | Gene3D:3.40.50.720 | Gene3D:3.90.110.10 | MapMan:5.7.3.6.5 | EntrezGene:816808 | UniProt:A0A178VML0 |
| ProteinID:AAC63589.1 | ProteinID:AEC07353.1 | EMBL:AF428346 | EMBL:AK227067 | ArrayExpress:AT2G22780 | EnsemblPlantsGene:AT2G22780 |
| RefSeq:AT2G22780 | TAIR:AT2G22780 | RefSeq:AT2G22780-TAIR-G | EnsemblPlants:AT2G22780.1 | TAIR:AT2G22780.1 | Unigene:At.13158 |
| EMBL:BT003009 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005777 | GO:GO:0005975 | GO:GO:0006091 | GO:GO:0006097 | GO:GO:0006099 |
| GO:GO:0006108 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009507 |
| GO:GO:0009536 | GO:GO:0009987 | GO:GO:0016491 | GO:GO:0016615 | GO:GO:0016616 | GO:GO:0019752 |
| GO:GO:0030060 | GO:GO:0031998 | GO:GO:0055114 | GO:GO:0080093 | InterPro:IPR015955 | InterPro:L-lactate/malate_DH |
| InterPro:Lactate/malate_DH_C | InterPro:Lactate/malate_DH_N | InterPro:Lactate_DH/Glyco_Ohase_4_C | InterPro:Malate_DH_AS | InterPro:Malate_DH_type1 | InterPro:NAD(P)-bd_dom_sf |
| RefSeq:NP_179863.1 | UniProt:O82399 | ProteinID:OAP07549.1 | PFAM:PF00056 | PFAM:PF02866 | PIRSF:PIRSF000102 |
| Symbol:PMDH1 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001170 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | ScanProsite:PS00068 | PANTHER:PTHR11540 | PANTHER:PTHR11540:SF21 | UniProt:Q0WUS4 |
| SUPFAM:SSF51735 | SUPFAM:SSF56327 | TIGRFAMs:TIGR01772 | UniParc:UPI0000000D3C | : | : |
Description
PMDH1Malate dehydrogenase [Source:UniProtKB/TrEMBL;Acc:Q0WUS4]
Coordinates
chr2:-:9689295..9692154
Molecular Weight (calculated)
37467.8 Da
IEP (calculated)
8.063
GRAVY (calculated)
0.140
Length
354 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPNQRIARI SAHLNPPNLH NQIADGSGLN RVACRAKGGS PGFKVAILGA AGGIGQPLAM LMKMNPLVSV LHLYDVANAP GVTADISHMD TSAVVRGFLG
101: QPQLEEALTG MDLVIIPAGV PRKPGMTRDD LFNINAGIVR TLSEAIAKCC PKAIVNIISN PVNSTVPIAA EVFKKAGTFD PKKLMGVTML DVVRANTFVA
201: EVMSLDPREV EVPVVGGHAG VTILPLLSQV KPPCSFTQKE IEYLTDRIQN GGTEVVEAKA GAGSATLSMA YAAVEFADAC LRGLRGDANI VECAYVASHV
301: TELPFFASKV RLGRCGIDEV YGLGPLNEYE RMGLEKAKKE LSVSIHKGVT FAKK
101: QPQLEEALTG MDLVIIPAGV PRKPGMTRDD LFNINAGIVR TLSEAIAKCC PKAIVNIISN PVNSTVPIAA EVFKKAGTFD PKKLMGVTML DVVRANTFVA
201: EVMSLDPREV EVPVVGGHAG VTILPLLSQV KPPCSFTQKE IEYLTDRIQN GGTEVVEAKA GAGSATLSMA YAAVEFADAC LRGLRGDANI VECAYVASHV
301: TELPFFASKV RLGRCGIDEV YGLGPLNEYE RMGLEKAKKE LSVSIHKGVT FAKK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.