Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH55141 | Soybean | cytosol, mitochondrion, nucleus, plastid | 29.95 | 83.87 |
| KRG90046 | Soybean | nucleus | 16.36 | 78.89 |
| Bra035704.1-P | Field mustard | nucleus | 76.73 | 76.91 |
| CDX77176 | Canola | cytosol, mitochondrion, nucleus, plastid | 76.5 | 76.67 |
| KRH58007 | Soybean | nucleus | 15.9 | 76.67 |
| CDY30490 | Canola | nucleus | 76.5 | 76.5 |
| CDY04559 | Canola | cytosol, mitochondrion, nucleus, plastid | 75.35 | 76.05 |
| Bra011953.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 74.88 | 75.58 |
| CDY15737 | Canola | cytosol | 75.12 | 75.29 |
| KRH25014 | Soybean | cytosol, nucleus, plastid | 62.44 | 67.58 |
| KRH29911 | Soybean | cytosol, nucleus, plastid | 63.36 | 66.91 |
| VIT_06s0004g02810.t01 | Wine grape | cytosol, nucleus, plastid | 61.75 | 64.89 |
| KRH26403 | Soybean | cytosol, mitochondrion, nucleus, plastid | 60.14 | 63.5 |
| KRH22885 | Soybean | cytosol, mitochondrion, nucleus, plastid | 57.14 | 63.1 |
| PGSC0003DMT400020800 | Potato | nucleus | 57.83 | 61.37 |
| Solyc11g069460.1.1 | Tomato | nucleus | 56.22 | 58.94 |
| GSMUA_Achr11P... | Banana | cytosol, mitochondrion, nucleus, plastid | 53.92 | 52.82 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, plastid | 54.38 | 52.33 |
| GSMUA_Achr11P... | Banana | cytosol, mitochondrion, nucleus, plastid | 56.22 | 51.91 |
| Zm00001d032679_P001 | Maize | nucleus | 52.77 | 44.47 |
| Zm00001d014011_P001 | Maize | mitochondrion, nucleus, plastid | 53.0 | 44.23 |
| Os10t0480500-01 | Rice | cytosol, nucleus, plastid | 52.3 | 44.16 |
| TraesCS1A01G157700.3 | Wheat | nucleus | 52.07 | 42.97 |
| TraesCS1B01G174000.1 | Wheat | nucleus | 52.07 | 42.88 |
| HORVU1Hr1G041820.1 | Barley | nucleus | 51.84 | 42.69 |
| AT3G26932.2 | Thale cress | nucleus | 35.25 | 42.62 |
| TraesCS1D01G155300.1 | Wheat | nucleus | 51.84 | 42.29 |
| KXG38314 | Sorghum | mitochondrion, nucleus | 52.3 | 42.04 |
| AT5G41070.1 | Thale cress | nucleus | 37.1 | 40.97 |
| AT3G62800.1 | Thale cress | nucleus | 19.59 | 23.94 |
| AT1G09700.1 | Thale cress | plastid | 15.9 | 16.47 |
Protein Annotations
| Gene3D:3.30.160.20 | MapMan:35.1 | EntrezGene:817386 | ProteinID:AAD20688.1 | ProteinID:AEC08114.1 | ArrayExpress:AT2G28380 |
| EnsemblPlantsGene:AT2G28380 | RefSeq:AT2G28380 | TAIR:AT2G28380 | RefSeq:AT2G28380-TAIR-G | EnsemblPlants:AT2G28380.1 | TAIR:AT2G28380.1 |
| EMBL:AY034976 | EMBL:AY062965 | Unigene:At.13732 | Symbol:DRB2 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003723 | GO:GO:0003725 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006139 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0019538 | GO:GO:0031047 | GO:GO:0035196 |
| GO:GO:0040029 | GO:GO:0070919 | InterPro:IPR014720 | RefSeq:NP_565672.1 | PFAM:PF00035 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PFscan:PS50137 |
| PANTHER:PTHR10910 | PANTHER:PTHR10910:SF141 | UniProt:Q9SKN2 | SMART:SM00358 | SUPFAM:SSF54768 | UniParc:UPI000009F29E |
| InterPro:dsRBD_dom | SEG:seg | : | : | : | : |
Description
DRB2Double-stranded RNA-binding protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKN2]
Coordinates
chr2:-:12133732..12136241
Molecular Weight (calculated)
47442.7 Da
IEP (calculated)
9.747
GRAVY (calculated)
-0.412
Length
434 amino acids
Sequence
(BLAST)
(BLAST)
001: MYKNQLQELA QRSCFNLPSY TCIREGPDHA PRFKATVNFN GEIFESPQYC STLRQAEHSA AEVALNALSN RGPSHSLAAR ILDETGVYKN LLQEIAQRVG
101: APLPRYTTFR SGLGHQPVFT GTVELAGITF TGDPAKNKKQ AEKNAAMAAW SSLKQLAKET SSSMPEPENI DELEQVIIAR ALINYRIKEN IGTGSSSSAP
201: VPFAKKFFMQ NLRPTSPQPS PATTSRILPF ICPKQPSRSS RSSLAATSGI DRIMAAALES RSYQRPQQRF ANPPYVPMRQ FRSQCHGMAP PVTIRTAVPV
301: FSAPPMPPPP CTNNTQLPSS VYVPSLMRTA PPVRIAPPVT IRTAVPVFAS APPVRIRTAV KPTVEAGETR ISSVQEKESI PVLPDSLEIG VEGSTITITD
401: CEKTASKETE RAEFKDSSKG EPETARERLE NLKI
101: APLPRYTTFR SGLGHQPVFT GTVELAGITF TGDPAKNKKQ AEKNAAMAAW SSLKQLAKET SSSMPEPENI DELEQVIIAR ALINYRIKEN IGTGSSSSAP
201: VPFAKKFFMQ NLRPTSPQPS PATTSRILPF ICPKQPSRSS RSSLAATSGI DRIMAAALES RSYQRPQQRF ANPPYVPMRQ FRSQCHGMAP PVTIRTAVPV
301: FSAPPMPPPP CTNNTQLPSS VYVPSLMRTA PPVRIAPPVT IRTAVPVFAS APPVRIRTAV KPTVEAGETR ISSVQEKESI PVLPDSLEIG VEGSTITITD
401: CEKTASKETE RAEFKDSSKG EPETARERLE NLKI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.