Factsheet for AT3G18650.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY18534	Canola	mitochondrion, nucleus, plastid	31.35	49.19
CDX99332	Canola	plastid	40.93	44.38
Bra022341.1-P	Field mustard	plastid	40.67	42.66
CDX92256	Canola	plastid	40.67	42.43
AT5G26865.1	Thale cress	nucleus	12.69	38.89
AT5G27050.1	Thale cress	nucleus	11.92	38.33
CDX95509	Canola	plastid	27.72	37.02
Bra037571.1-P	Field mustard	mitochondrion, nucleus, plastid	32.38	36.55
AT4G02235.1	Thale cress	nucleus	16.32	32.14
CDX75976	Canola	mitochondrion, nucleus	16.84	32.02
AT5G27090.1	Thale cress	nucleus, plastid	14.77	30.48
AT4G11250.1	Thale cress	nucleus	25.91	30.4
AT5G65330.1	Thale cress	nucleus	26.42	29.91
AT5G27580.1	Thale cress	nucleus	16.84	29.15
AT5G27944.1	Thale cress	nucleus	16.58	28.57
AT5G40220.1	Thale cress	nucleus	23.06	27.47
AT5G41200.1	Thale cress	nucleus, plastid	22.54	26.36
AT5G27070.1	Thale cress	nucleus	19.43	26.13
AT5G39750.1	Thale cress	nucleus	22.8	24.79
AT5G39810.1	Thale cress	plastid	20.73	24.32
AT5G40120.1	Thale cress	nucleus	23.32	23.38
AT5G26950.1	Thale cress	nucleus	17.1	22.84
AT5G38740.1	Thale cress	nucleus	24.61	22.3
AT5G37415.1	Thale cress	nucleus	18.13	22.15

Protein Annotations

MapMan:15.5.14	Gene3D:3.40.1810.10	EntrezGene:821396	ProteinID:AEE76126.1	Symbol:AGL103	ArrayExpress:AT3G18650
EnsemblPlantsGene:AT3G18650	RefSeq:AT3G18650	TAIR:AT3G18650	RefSeq:AT3G18650-TAIR-G	EnsemblPlants:AT3G18650.1	TAIR:AT3G18650.1
Unigene:At.65106	ProteinID:BAB01791.1	EMBL:BT029549	ncoils:Coil	GO:GO:0000982	GO:GO:0000987
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0045944
GO:GO:0046983	InterPro:IPR002100	InterPro:IPR036879	InterPro:MADS_SRF-like	RefSeq:NP_188495.1	PFAM:PF00319
PO:PO:0020090	PRINTS:PR00404	PFscan:PS50066	PANTHER:PTHR11945	PANTHER:PTHR11945:SF350	UniProt:Q9LSB2
SMART:SM00432	SUPFAM:SSF55455	InterPro:TF_MADSbox	InterPro:TF_MADSbox_sf	UniParc:UPI00000AA4BD	SEG:seg

Description

AGL103Agamous-like MADS-box protein AGL103 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSB2]

Coordinates

chr3:-:6417344..6418504

Molecular Weight (calculated)

43554.1 Da

IEP (calculated)

9.200

GRAVY (calculated)

-0.781

Length

386 amino acids

Sequence
(BLAST)

001: MASSSSSSLS FSTSKKNKTF FKKPNSAFSS SRATSLIKRQ QTVFKKAKEL SILCDIDVCV ICYGSNGELK TWPEEREKVK AIARRYGELS ETKRRKGSVD
101: LHEFLEKMNK DDPEKEEKKK IKVRRVPKVK YPVWDPRFDN YSVEQLMGLV QSLERNLTRI QHRTCAVVEA QGQRRVQYTN MANQELMMAN TMNQLQQHSN
201: QVSMYLWNHG NGAFSQIPVS ALASNQTQSL APIPPELMIY PNSDAGNYSG SLGVQGTGIN GLQNMNMLTY NNINSVNDFS KQFDQNSRAE SYSSLLGVHE
301: DGNNEFENPN MSSRNNFNVQ DCAGLLGMQG AGTNGLQSMN MHDYSNNNSI NSNGLSHQYV QFPTYNSQHQ DRVFNLDQNG NNTRSL

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.