Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT5G39750.1 | Thale cress | nucleus | 55.06 | 49.01 |
| AT5G41200.1 | Thale cress | nucleus, plastid | 44.62 | 42.73 |
| AT5G40220.1 | Thale cress | nucleus | 43.67 | 42.59 |
| AT5G39810.1 | Thale cress | plastid | 43.04 | 41.34 |
| AT5G38740.1 | Thale cress | nucleus | 50.32 | 37.32 |
| AT5G27050.1 | Thale cress | nucleus | 13.92 | 36.67 |
| AT5G26865.1 | Thale cress | nucleus | 13.61 | 34.13 |
| AT5G40120.1 | Thale cress | nucleus | 41.14 | 33.77 |
| CDY36817 | Canola | plastid | 31.01 | 33.56 |
| AT4G11250.1 | Thale cress | nucleus | 34.81 | 33.43 |
| AT4G02235.1 | Thale cress | nucleus | 20.57 | 33.16 |
| CDY65583 | Canola | plastid | 29.43 | 32.4 |
| CDY68883 | Canola | nucleus | 30.06 | 31.99 |
| AT5G65330.1 | Thale cress | nucleus | 34.49 | 31.96 |
| CDY44599 | Canola | nucleus | 33.23 | 31.25 |
| Bra025609.1-P | Field mustard | nucleus | 32.91 | 30.95 |
| CDY44595 | Canola | nucleus | 30.7 | 30.41 |
| CDY36823 | Canola | nucleus | 29.11 | 30.16 |
| Bra025607.1-P | Field mustard | nucleus | 31.01 | 28.08 |
| CDY30838 | Canola | nucleus | 30.38 | 26.82 |
| Bra025619.1-P | Field mustard | nucleus | 29.75 | 25.61 |
| AT5G27090.1 | Thale cress | nucleus, plastid | 14.56 | 24.6 |
| AT5G27944.1 | Thale cress | nucleus | 15.51 | 21.88 |
| AT5G27580.1 | Thale cress | nucleus | 15.19 | 21.52 |
| CDY44597 | Canola | nucleus | 14.87 | 19.83 |
| AT5G26950.1 | Thale cress | nucleus | 17.09 | 18.69 |
| AT3G18650.1 | Thale cress | plastid | 22.15 | 18.13 |
| AT5G27070.1 | Thale cress | nucleus | 16.14 | 17.77 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | EntrezGene:833717 | ProteinID:AED94184.1 | Symbol:AGL105 | ArrayExpress:AT5G37415 |
| EnsemblPlantsGene:AT5G37415 | RefSeq:AT5G37415 | TAIR:AT5G37415 | RefSeq:AT5G37415-TAIR-G | EnsemblPlants:AT5G37415.1 | TAIR:AT5G37415.1 |
| Unigene:At.45528 | UniProt:B3H4N9 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | InterPro:IPR002100 | InterPro:IPR036879 | RefSeq:NP_680360.2 | PFAM:PF00319 |
| PANTHER:PTHR11945 | PANTHER:PTHR11945:SF350 | SUPFAM:SSF55455 | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | UniParc:UPI0001739569 |
| SEG:seg | : | : | : | : | : |
Description
AGL105AGAMOUS-like 105 [Source:UniProtKB/TrEMBL;Acc:B3H4N9]
Coordinates
chr5:-:14839047..14840301
Molecular Weight (calculated)
37290.6 Da
IEP (calculated)
8.736
GRAVY (calculated)
-0.534
Length
316 amino acids
Sequence
(BLAST)
(BLAST)
001: MRDPDIVQNT RSLILLRVLT HEKLIQSHRY FFVGWIHKNL SRFRRKIRRR FLHCDFSGFG FFPRRFLFGF VLEKMDHLQE SFRGSELCIL CDIEACVIYY
101: GPDGELKTWP KEREKVEDIA LRYSQLNEAL RRKKSVTLYD FLNKKKDKTN LEKKAMITDN DDLKTCLKNV NVLKSPIADH YFNDQISQLI QSLEPHVSKV
201: QERIRFVESQ KHKETKLDHQ SLASIYSLNQ SLNPSQFTLF LYNHGDNTMS QIPNMFMNNN NFQHSFVSNT QDYSALQESV NNNYGLMPNV LCGYDQNLFT
301: SDITNNNLLI DNSMYL
101: GPDGELKTWP KEREKVEDIA LRYSQLNEAL RRKKSVTLYD FLNKKKDKTN LEKKAMITDN DDLKTCLKNV NVLKSPIADH YFNDQISQLI QSLEPHVSKV
201: QERIRFVESQ KHKETKLDHQ SLASIYSLNQ SLNPSQFTLF LYNHGDNTMS QIPNMFMNNN NFQHSFVSNT QDYSALQESV NNNYGLMPNV LCGYDQNLFT
301: SDITNNNLLI DNSMYL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.