Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT5G26865.1 | Thale cress | nucleus | 75.83 | 72.22 |
| AT5G27090.1 | Thale cress | nucleus, plastid | 75.0 | 48.13 |
| AT5G27580.1 | Thale cress | nucleus | 82.5 | 44.39 |
| AT5G27944.1 | Thale cress | nucleus | 77.5 | 41.52 |
| AT5G27070.1 | Thale cress | nucleus | 75.83 | 31.71 |
| AT5G26950.1 | Thale cress | nucleus | 75.0 | 31.14 |
| Bra020923.1-P | Field mustard | nucleus | 40.0 | 22.97 |
| CDY63012 | Canola | cytosol | 37.5 | 22.5 |
| AT4G02235.1 | Thale cress | nucleus | 31.67 | 19.39 |
| Bra004071.1-P | Field mustard | nucleus | 44.17 | 18.66 |
| Bra018741.1-P | Field mustard | nucleus | 40.83 | 18.56 |
| Bra007138.1-P | Field mustard | nucleus | 42.5 | 18.15 |
| CDY63010 | Canola | plastid | 9.17 | 17.74 |
| CDX73406 | Canola | plastid | 41.67 | 17.73 |
| CDX93744 | Canola | nucleus | 41.67 | 17.54 |
| Bra028019.1-P | Field mustard | nucleus | 41.67 | 17.54 |
| CDX93708 | Canola | nucleus | 38.33 | 16.67 |
| CDY28851 | Canola | nucleus | 39.17 | 16.55 |
| CDX93682 | Canola | nucleus | 33.33 | 16.53 |
| AT5G41200.1 | Thale cress | nucleus, plastid | 44.17 | 16.06 |
| AT5G40220.1 | Thale cress | nucleus | 43.33 | 16.05 |
| CDX73409 | Canola | nucleus | 30.0 | 15.65 |
| CDY27890 | Canola | nucleus | 40.83 | 15.36 |
| Bra015129.1-P | Field mustard | nucleus | 40.83 | 15.36 |
| Bra018767.1-P | Field mustard | nucleus | 38.33 | 15.03 |
| AT5G65330.1 | Thale cress | nucleus | 40.83 | 14.37 |
| AT4G11250.1 | Thale cress | nucleus | 39.17 | 14.29 |
| CDX93743 | Canola | nucleus | 30.83 | 14.07 |
| AT5G37415.1 | Thale cress | nucleus | 36.67 | 13.92 |
| AT5G40120.1 | Thale cress | nucleus | 44.17 | 13.77 |
| Bra028020.1-P | Field mustard | nucleus | 30.0 | 13.69 |
| CDY40595 | Canola | cytosol, golgi, vacuole | 38.33 | 13.53 |
| AT5G39810.1 | Thale cress | plastid | 36.67 | 13.37 |
| CDY67867 | Canola | mitochondrion | 46.67 | 13.27 |
| CDY40199 | Canola | nucleus | 28.33 | 13.03 |
| AT5G39750.1 | Thale cress | nucleus | 38.33 | 12.96 |
| AT5G38740.1 | Thale cress | nucleus | 45.0 | 12.68 |
| CDY56522 | Canola | nucleus | 24.17 | 12.45 |
| AT3G18650.1 | Thale cress | plastid | 38.33 | 11.92 |
| CDY18533 | Canola | nucleus | 4.17 | 6.85 |
| Bra007139.1-P | Field mustard | nucleus | 9.17 | 6.47 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | EntrezGene:832763 | ProteinID:AED93644.1 | Symbol:AGL101 | ArrayExpress:AT5G27050 |
| EnsemblPlantsGene:AT5G27050 | RefSeq:AT5G27050 | TAIR:AT5G27050 | RefSeq:AT5G27050-TAIR-G | EnsemblPlants:AT5G27050.1 | TAIR:AT5G27050.1 |
| Unigene:At.55030 | EMBL:DQ056693 | GO:GO:0000982 | GO:GO:0000987 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045944 | GO:GO:0046983 | InterPro:IPR002100 |
| InterPro:IPR036879 | InterPro:MADS_SRF-like | RefSeq:NP_198057.1 | PFAM:PF00319 | PFscan:PS50066 | PANTHER:PTHR11945 |
| PANTHER:PTHR11945:SF350 | UniProt:Q4PSE3 | SUPFAM:SSF55455 | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | UniParc:UPI00001625E3 |
| SEG:seg | : | : | : | : | : |
Description
AGL101AGAMOUS-like 101 [Source:UniProtKB/TrEMBL;Acc:Q4PSE3]
Coordinates
chr5:+:9520276..9520638
Molecular Weight (calculated)
14189.4 Da
IEP (calculated)
9.969
GRAVY (calculated)
-0.568
Length
120 amino acids
Sequence
(BLAST)
(BLAST)
001: MFKKALELST LCNIEVCVIY YGRDGELFKT WPEDESKVRD MAERFTKLNE RERRKKRTNL SLFLRKKILD DNKLSGKVLE MKDSLERGLR VLQDKLLLLQ
101: PENQTKSLTR SVSSLDYVFV
101: PENQTKSLTR SVSSLDYVFV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.