Factsheet for AT5G41200.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 3
mitochondrion 1
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT5G40220.1	Thale cress	nucleus	81.82	83.33
AT5G39750.1	Thale cress	nucleus	66.36	61.69
AT5G40120.1	Thale cress	nucleus	70.0	60.0
AT5G39810.1	Thale cress	plastid	57.88	58.05
AT5G38740.1	Thale cress	nucleus	65.45	50.7
AT5G37415.1	Thale cress	nucleus	42.73	44.62
AT5G26865.1	Thale cress	nucleus	16.97	44.44
AT4G02235.1	Thale cress	nucleus	26.36	44.39
AT5G27050.1	Thale cress	nucleus	16.06	44.17
CDY68883	Canola	nucleus	38.79	43.1
CDY44599	Canola	nucleus	41.82	41.07
Bra025609.1-P	Field mustard	nucleus	41.52	40.77
CDY65583	Canola	plastid	35.45	40.77
AT5G65330.1	Thale cress	nucleus	41.82	40.47
CDY36817	Canola	plastid	35.15	39.73
CDY36823	Canola	nucleus	36.36	39.34
AT4G11250.1	Thale cress	nucleus	39.09	39.21
CDY44595	Canola	nucleus	34.24	35.42
AT5G27090.1	Thale cress	nucleus, plastid	20.0	35.29
CDY30838	Canola	nucleus	37.58	34.64
Bra025607.1-P	Field mustard	nucleus	36.36	34.38
Bra025619.1-P	Field mustard	nucleus	37.27	33.52
AT5G27580.1	Thale cress	nucleus	20.91	30.94
AT5G27944.1	Thale cress	nucleus	20.3	29.91
AT5G27070.1	Thale cress	nucleus	21.52	24.74
AT5G26950.1	Thale cress	nucleus	21.52	24.57
AT3G18650.1	Thale cress	plastid	26.36	22.54
CDY44597	Canola	nucleus	14.85	20.68

Protein Annotations

MapMan:15.5.14	Gene3D:3.40.1810.10	EntrezGene:834122	ProteinID:AED94653.1	Symbol:AGL75	ArrayExpress:AT5G41200
EnsemblPlantsGene:AT5G41200	RefSeq:AT5G41200	TAIR:AT5G41200	RefSeq:AT5G41200-TAIR-G	EnsemblPlants:AT5G41200.1	TAIR:AT5G41200.1
Unigene:At.55290	ProteinID:BAB09722.1	EMBL:BT030016	ncoils:Coil	GO:GO:0000982	GO:GO:0000987
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0045944
GO:GO:0046983	InterPro:IPR002100	InterPro:IPR036879	InterPro:MADS_SRF-like	RefSeq:NP_198936.1	PFAM:PF00319
PO:PO:0020090	PFscan:PS50066	PANTHER:PTHR11945	PANTHER:PTHR11945:SF350	UniProt:Q9FLL0	SMART:SM00432
SUPFAM:SSF55455	InterPro:TF_MADSbox	InterPro:TF_MADSbox_sf	UniParc:UPI00000A1E58	SEG:seg	:

Description

AGL75Agamous-like MADS-box protein AGL75 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLL0]

Coordinates

chr5:+:16490544..16491536

Molecular Weight (calculated)

37731.6 Da

IEP (calculated)

8.185

GRAVY (calculated)

-0.704

Length

330 amino acids

Sequence
(BLAST)

001: MTMRSSSPSS SSSYSLAFTS LSNRLETIFK KASELCTLCD IEACVIYYGP DGELKTWPKE KEKVRDIALR YSLLNEALRR KKSVNLHGFL NKKKNKGLKN
101: PNKKMKTSLK NVNILKYPLA DHYPPDQVSP LIQSLELHVS KFQERLRFLE SQKQNQTKPD HQSLTPSSLN HYTQSLNPSQ FSLFMYNHGD NTLSQIPVSA
201: SNFNQDYFSA LLEESELKNQ LMKPEICGYD QNQNMSMGDI TNNKFQDPCV SNKEAVQESV NNFGLNQLMY KEFYGCDQNM SMGNINSNSF QNPCVSNTQH
301: YSAVEESVKN PWLNQLMQNE LYGYGYAGFC

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.