Factsheet for AT5G40120.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
Predotar:	plastid
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT5G41200.1	Thale cress	nucleus, plastid	60.0	70.0
AT5G40220.1	Thale cress	nucleus	55.32	65.74
AT5G39750.1	Thale cress	nucleus	53.77	58.31
AT5G39810.1	Thale cress	plastid	46.49	54.41
AT5G38740.1	Thale cress	nucleus	51.95	46.95
AT5G27050.1	Thale cress	nucleus	13.77	44.17
AT4G02235.1	Thale cress	nucleus	22.08	43.37
AT5G26865.1	Thale cress	nucleus	13.77	42.06
CDY68883	Canola	nucleus	32.21	41.75
AT5G37415.1	Thale cress	nucleus	33.77	41.14
CDY44599	Canola	nucleus	35.06	40.18
CDY36823	Canola	nucleus	31.69	40.0
Bra025609.1-P	Field mustard	nucleus	34.81	39.88
AT5G65330.1	Thale cress	nucleus	35.06	39.59
CDY65583	Canola	plastid	29.09	39.02
CDY36817	Canola	plastid	28.83	38.01
AT4G11250.1	Thale cress	nucleus	32.47	37.99
CDY44595	Canola	nucleus	30.65	36.99
Bra025607.1-P	Field mustard	nucleus	32.47	35.82
CDY30838	Canola	nucleus	33.25	35.75
AT5G27090.1	Thale cress	nucleus, plastid	17.14	35.29
Bra025619.1-P	Field mustard	nucleus	32.21	33.79
AT5G27944.1	Thale cress	nucleus	17.4	29.91
AT5G27580.1	Thale cress	nucleus	17.14	29.6
AT5G27070.1	Thale cress	nucleus	17.92	24.04
AT5G26950.1	Thale cress	nucleus	17.92	23.88
AT3G18650.1	Thale cress	plastid	23.38	23.32
CDY44597	Canola	nucleus	14.03	22.78

Protein Annotations

MapMan:15.5.14	Gene3D:3.40.1810.10	EntrezGene:834009	ProteinID:AED94511.1	Symbol:AGL76	ArrayExpress:AT5G40120
EnsemblPlantsGene:AT5G40120	RefSeq:AT5G40120	TAIR:AT5G40120	RefSeq:AT5G40120-TAIR-G	EnsemblPlants:AT5G40120.1	TAIR:AT5G40120.1
EMBL:AY141222	Unigene:At.30302	ProteinID:BAB10893.1	GO:GO:0000982	GO:GO:0000987	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0045944	GO:GO:0046983
InterPro:IPR002100	InterPro:IPR036879	InterPro:MADS_SRF-like	RefSeq:NP_198828.1	PFAM:PF00319	PFscan:PS50066
PANTHER:PTHR11945	PANTHER:PTHR11945:SF350	UniProt:Q9FL19	SMART:SM00432	SUPFAM:SSF55455	InterPro:TF_MADSbox
InterPro:TF_MADSbox_sf	UniParc:UPI00000AA484	SEG:seg	:	:	:

Description

AGL76AGAMOUS-like 76 [Source:UniProtKB/TrEMBL;Acc:Q9FL19]

Coordinates

chr5:+:16051879..16053036

Molecular Weight (calculated)

44449.8 Da

IEP (calculated)

9.359

GRAVY (calculated)

-0.809

Length

385 amino acids

Sequence
(BLAST)

001: MTMRSLPFSS SSYSLASTSL SNRLETIFKK ASELCTLCDI EACVIYYGPD GELKTWPKEK EKVRDIALRY SQLNEALRSK KSVNLHGFLN KKKKKKKKGL
101: KNPNNKRKTC LKKNVNVLKY PLADHYPPDQ VSQLTQSLKL HVSKFQERLR FLESQKQTKP DHQSLTPSSL NHQTQSLNPR QFSLFMYNHG DNTLSQISVS
201: ASNFNQNYFS ALLEQSELKN QLMKQDGYDQ NQNMRMGDIT NNNFQLPYFS KKEAVQESVN YFGMNQLMLK ELYGCDQNMC MGNINSNSFQ HPCVSKAQHY
301: SAVEGSVNNQ RQSELMQQEL CGYEQNMCFT NNNFQVSNKE AVQESVTNFG LMQHELYGCD QNMSMGNIIN NSFQQRLKHR TRICE

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.