Factsheet for AT4G00315.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT1G55660.1	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	88.89	79.67
CDY22729	Canola	nucleus	27.66	53.51
AT4G15075.1	Thale cress	cytosol	19.73	51.79
AT5G56700.2	Thale cress	cytosol	39.0	47.78
AT5G56690.1	Thale cress	endoplasmic reticulum	42.63	46.77
AT5G60610.1	Thale cress	cytosol	39.68	45.1
AT2G26860.2	Thale cress	cytosol	39.23	42.72
AT5G62970.1	Thale cress	cytosol	42.63	41.87
CDY09047	Canola	cytosol	42.63	41.69
AT5G38580.1	Thale cress	cytosol	14.06	36.9
AT5G56410.1	Thale cress	cytosol	41.72	36.58
AT4G15060.1	Thale cress	cytosol	44.22	36.18
AT5G11370.1	Thale cress	cytosol, extracellular	25.17	35.69
AT1G19410.1	Thale cress	cytosol	33.79	34.25
AT4G10420.1	Thale cress	extracellular, golgi, nucleus	16.1	22.05
AT5G38590.2	Thale cress	cytosol	18.59	20.0
AT5G38570.1	Thale cress	cytosol, nucleus, plasma membrane	17.01	19.79
AT3G54910.2	Thale cress	cytosol	16.33	19.3
AT5G38565.1	Thale cress	cytosol, peroxisome, plastid	14.06	17.77
AT4G10400.1	Thale cress	cytosol	16.1	17.36
AT4G10410.1	Thale cress	cytosol, plasma membrane, plastid	8.62	14.45
AT4G09920.1	Thale cress	cytosol, plasma membrane, plastid	7.71	10.76

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	EntrezGene:827929	UniProt:A0A178UUX2	ProteinID:AAB62837.1	ProteinID:AAF02795.1
ProteinID:AEE81856.1	ArrayExpress:AT4G00315	EnsemblPlantsGene:AT4G00315	RefSeq:AT4G00315	TAIR:AT4G00315	RefSeq:AT4G00315-TAIR-G
EnsemblPlants:AT4G00315.1	TAIR:AT4G00315.1	Unigene:At.54059	ProteinID:CAB80790.1	InterPro:F-box-like_dom_sf	InterPro:F-box_dom
InterPro:FBD	GO:GO:0000003	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0007275
GO:GO:0008150	GO:GO:0009628	GO:GO:0009791	GO:GO:0048579	GO:GO:0048587	InterPro:IPR001810
InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt_2	RefSeq:NP_849271.1	ProteinID:OAO97415.1	PFAM:PF00646
PFAM:PF07723	PFAM:PF08387	PFscan:PS50181	PANTHER:PTHR32212	PANTHER:PTHR32212:SF173	UniProt:Q3EAE5
SMART:SM00256	SMART:SM00579	SUPFAM:SSF52047	SUPFAM:SSF81383	UniParc:UPI0000196AD8	SEG:seg

Description

Putative F-box/FBD/LRR-repeat protein At4g00315 [Source:UniProtKB/Swiss-Prot;Acc:Q3EAE5]

Coordinates

chr4:+:137404..138888

Molecular Weight (calculated)

50953.8 Da

IEP (calculated)

6.325

GRAVY (calculated)

-0.185

Length

441 amino acids

Sequence
(BLAST)

001: MDKTSQLPDE LLVKVLSFLP TKDAVRTSLL SMRWKSLWMW LPKLEYDFRH YSVSEGQGLA RFITLSLLGH KAPAIESLSL KLRYGAIGSI KPEDIYLWVS
101: LAVHDSNVRE LSLKLCTFAE RPTKLPKSLY KCKSIVILKL KDEILVDVPR KVCLPSLKTL FLGRVTYSDE DSLHRLLSNC PVLEDLVVER DRIDNLGKLS
201: VVVKSLQRLT LKMSCPCHLD GIMMNTPSLK YLKVTDERQE SDSDNESDSD SPRYFYDFED MPKLEEADFV LTFQNIKKFF KFVTSIKRLS LCLGVYTEES
301: LYHEGLVFNQ LEQLKICSCD SDWSILLSRL LESSPNLREL EAYVIEDHPD RRVDLPNQWG NQLNCVPKCL LSSLETFKWS EMYGLLQNQM DVAKYILRNA
401: RCLKSATIFF PTTYAKETRD EMIEELSLSF QGPETCQVFF H

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.