Factsheet for AT2G26860.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY38511	Canola	cytosol	61.23	60.49
CDY35372	Canola	cytosol	14.57	60.2
CDY53464	Canola	cytosol	59.26	58.82
CDY55715	Canola	cytosol, nucleus, plasma membrane	58.77	58.05
Bra032049.1-P	Field mustard	cytosol, extracellular, plastid	57.53	56.28
AT5G60610.1	Thale cress	cytosol	52.59	54.9
AT5G56700.2	Thale cress	cytosol	48.15	54.17
Bra032036.1-P	Field mustard	cytosol	23.7	53.04
AT5G56690.1	Thale cress	endoplasmic reticulum	48.89	49.25
AT4G00315.1	Thale cress	cytosol	42.72	39.23
AT5G62970.1	Thale cress	cytosol	41.48	37.42
AT1G55660.1	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	43.21	35.57
AT5G56410.1	Thale cress	cytosol	41.98	33.8
AT5G38580.1	Thale cress	cytosol	13.83	33.33
AT1G19410.1	Thale cress	cytosol	34.32	31.95
AT4G15075.1	Thale cress	cytosol	12.59	30.36
AT5G11370.1	Thale cress	cytosol, extracellular	22.47	29.26
AT4G15060.1	Thale cress	cytosol	37.53	28.2
AT4G10420.1	Thale cress	extracellular, golgi, nucleus	16.79	21.12
AT3G54910.2	Thale cress	cytosol	18.02	19.57
AT5G38565.1	Thale cress	cytosol, peroxisome, plastid	16.79	19.48
AT5G38590.2	Thale cress	cytosol	19.01	18.78
AT5G38570.1	Thale cress	cytosol, nucleus, plasma membrane	17.53	18.73
AT4G10410.1	Thale cress	cytosol, plasma membrane, plastid	11.11	17.11
AT4G10400.1	Thale cress	cytosol	16.3	16.14
AT4G09920.1	Thale cress	cytosol, plasma membrane, plastid	8.64	11.08

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	EntrezGene:817227	ProteinID:AAC32239.1	ProteinID:AEC07899.1	ProteinID:AEC07900.2
ArrayExpress:AT2G26860	EnsemblPlantsGene:AT2G26860	RefSeq:AT2G26860	TAIR:AT2G26860	RefSeq:AT2G26860-TAIR-G	EnsemblPlants:AT2G26860.2
TAIR:AT2G26860.2	EMBL:AY219106	EMBL:AY219107	EMBL:DQ446570	InterPro:F-box-like_dom_sf	InterPro:F-box_dom
InterPro:FBD	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0008150	InterPro:IPR001810
InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt_2	RefSeq:NP_001318294.1	RefSeq:NP_180254.1	PFAM:PF00646
PFAM:PF07723	PFAM:PF08387	PO:PO:0000293	PFscan:PS50181	PANTHER:PTHR32212	PANTHER:PTHR32212:SF173
UniProt:Q84X02	SMART:SM00256	SUPFAM:SSF52047	SUPFAM:SSF81383	UniParc:UPI000009D9CD	:

Description

FBD-associated F-box protein At2g26860 [Source:UniProtKB/Swiss-Prot;Acc:Q84X02]

Coordinates

chr2:-:11451973..11453843

Molecular Weight (calculated)

47053.0 Da

IEP (calculated)

5.014

GRAVY (calculated)

0.061

Length

405 amino acids

Sequence
(BLAST)

001: MDRISGLPDE LLVEILHCLP TKEVVSTSIL SKRWEFLWLW VPKLTFVMNH YESDLPIQDF ITKNLRLLKP QVIESFHLQC FSSSFKPEDI KHWVVTTISR
101: RVRELIINYC DLSWLDKPVV LLDLPNSLYT CTSLVTLKLI GHSIIVDVPR TVSLPCLKTL ELDSVAYSNE ESLRLLLSYC PVLEDLTIHR DMHDNVKTLV
201: IIVPSLLRLN LPIDGAYSCD GYVIVTPALK YLKVPGLYRE DFSYLLTHMP NVEEADLSVE QDVERLFESI TSVKRLSLFV LLDIEDESMY HNGIYFNQLE
301: HLNLHIYRDN WSKLLVRLLE DSPKLRVLKI VVDGEPSFDE EFEHVSWIYN DESSVPKCLL DSLEVFEFAG YTRRPEERDF VSFILKHACH LKSSSISRLS
401: CYVLE

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.