Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra032036.1-P | Field mustard | cytosol | 95.92 | 51.93 |
| CDY34607 | Canola | cytosol | 41.84 | 28.87 |
| CDY35566 | Canola | cytosol | 38.78 | 27.74 |
| CDY40226 | Canola | cytosol | 25.51 | 24.04 |
| CDY55715 | Canola | cytosol, nucleus, plasma membrane | 93.88 | 22.44 |
| CDY22729 | Canola | nucleus | 46.94 | 20.18 |
| CDX84780 | Canola | cytosol | 34.69 | 18.68 |
| CDY52958 | Canola | cytosol | 37.76 | 18.23 |
| CDY38511 | Canola | cytosol | 67.35 | 16.1 |
| CDY41219 | Canola | cytosol | 27.55 | 15.98 |
| CDY53464 | Canola | cytosol | 65.31 | 15.69 |
| CDY17463 | Canola | cytosol | 45.92 | 15.1 |
| AT2G26860.2 | Thale cress | cytosol | 60.2 | 14.57 |
| CDX84569 | Canola | mitochondrion | 37.76 | 14.02 |
| CDY40230 | Canola | cytosol | 25.51 | 13.44 |
| CDY67485 | Canola | cytosol | 45.92 | 12.43 |
| CDY32785 | Canola | cytosol | 45.92 | 12.2 |
| CDY64738 | Canola | extracellular, nucleus, peroxisome | 37.76 | 11.9 |
| CDY72604 | Canola | extracellular | 32.65 | 10.88 |
| CDY66257 | Canola | mitochondrion | 46.94 | 10.7 |
| CDX78281 | Canola | cytosol | 34.69 | 10.62 |
| CDX73428 | Canola | cytosol, extracellular, plasma membrane | 32.65 | 10.0 |
| CDY09047 | Canola | cytosol | 44.9 | 9.76 |
| CDY41221 | Canola | cytosol | 31.63 | 9.48 |
| CDX78279 | Canola | cytosol | 36.73 | 9.35 |
| CDX91627 | Canola | cytosol | 30.61 | 9.23 |
| CDY23937 | Canola | mitochondrion | 35.71 | 9.04 |
| CDY40225 | Canola | endoplasmic reticulum, extracellular | 35.71 | 8.95 |
| CDY47798 | Canola | plasma membrane | 38.78 | 8.94 |
| CDX87839 | Canola | cytosol, endoplasmic reticulum, plastid | 37.76 | 8.73 |
| CDY27080 | Canola | cytosol | 29.59 | 8.53 |
| CDX78280 | Canola | extracellular, golgi, mitochondrion, plastid | 38.78 | 8.23 |
| CDY16725 | Canola | cytosol, extracellular, nucleus | 21.43 | 8.2 |
| CDX73430 | Canola | extracellular, vacuole | 34.69 | 8.19 |
| CDX74515 | Canola | cytosol | 38.78 | 8.1 |
| CDX73431 | Canola | endoplasmic reticulum, plasma membrane | 33.67 | 7.93 |
| CDY01651 | Canola | mitochondrion | 26.53 | 7.69 |
| CDX78283 | Canola | extracellular, plasma membrane | 31.63 | 7.47 |
| CDX96200 | Canola | extracellular, plasma membrane | 31.63 | 7.47 |
| CDX79668 | Canola | cytosol | 26.53 | 7.37 |
| CDX73432 | Canola | extracellular, plasma membrane | 31.63 | 7.28 |
| CDY40231 | Canola | cytosol | 30.61 | 7.14 |
| CDY48142 | Canola | cytosol | 13.27 | 6.6 |
| CDY41224 | Canola | cytosol, plasma membrane | 27.55 | 6.54 |
| CDX73429 | Canola | mitochondrion | 8.16 | 6.5 |
| CDY22940 | Canola | plasma membrane | 41.84 | 4.85 |
| CDY40228 | Canola | cytosol, extracellular, nucleus | 3.06 | 2.42 |
| CDY41220 | Canola | cytosol | 2.04 | 1.26 |
Protein Annotations
| EnsemblPlants:CDY35372 | EnsemblPlantsGene:GSBRNA2T00058349001 | PANTHER:PTHR32212 | PANTHER:PTHR32212:SF173 | ProteinID:CDY35372 | ProteinID:CDY35372.1 |
| UniParc:UPI0004EEF9C4 | UniProt:A0A078HC51 | MapMan:35.1 | : | : | : |
Description
BnaA04g14750DBnaA04g14750D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HC51]
Coordinates
chrLK032350:-:372455..373473
Molecular Weight (calculated)
11850.4 Da
IEP (calculated)
6.499
GRAVY (calculated)
0.204
Length
98 amino acids
Sequence
(BLAST)
(BLAST)
1: MLNYSYLVRH MPEVEEADIN VQYYLFNIFD SITSVKRLSL CVSFNIISDE YMYHDGIFFN RLEHLKLCIR FDYWFKLLFR LLHDSPNLRV LNLCVSVS
001: MDRISGLPDE LLVEILHCLP TKEVVSTSIL SKRWEFLWLW VPKLTFVMNH YESDLPIQDF ITKNLRLLKP QVIESFHLQC FSSSFKPEDI KHWVVTTISR
101: RVRELIINYC DLSWLDKPVV LLDLPNSLYT CTSLVTLKLI GHSIIVDVPR TVSLPCLKTL ELDSVAYSNE ESLRLLLSYC PVLEDLTIHR DMHDNVKTLV
201: IIVPSLLRLN LPIDGAYSCD GYVIVTPALK YLKVPGLYRE DFSYLLTHMP NVEEADLSVE QDVERLFESI TSVKRLSLFV LLDIEDESMY HNGIYFNQLE
301: HLNLHIYRDN WSKLLVRLLE DSPKLRVLKI VVDGEPSFDE EFEHVSWIYN DESSVPKCLL DSLEVFEFAG YTRRPEERDF VSFILKHACH LKSSSISRLS
401: CYVLE
101: RVRELIINYC DLSWLDKPVV LLDLPNSLYT CTSLVTLKLI GHSIIVDVPR TVSLPCLKTL ELDSVAYSNE ESLRLLLSYC PVLEDLTIHR DMHDNVKTLV
201: IIVPSLLRLN LPIDGAYSCD GYVIVTPALK YLKVPGLYRE DFSYLLTHMP NVEEADLSVE QDVERLFESI TSVKRLSLFV LLDIEDESMY HNGIYFNQLE
301: HLNLHIYRDN WSKLLVRLLE DSPKLRVLKI VVDGEPSFDE EFEHVSWIYN DESSVPKCLL DSLEVFEFAG YTRRPEERDF VSFILKHACH LKSSSISRLS
401: CYVLE
Arabidopsis Description
FBD-associated F-box protein At2g26860 [Source:UniProtKB/Swiss-Prot;Acc:Q84X02]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.