Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY41219 | Canola | cytosol | 51.1 | 55.03 |
| CDY35566 | Canola | cytosol | 37.91 | 50.37 |
| CDY40230 | Canola | cytosol | 47.25 | 46.24 |
| CDX73429 | Canola | mitochondrion | 29.67 | 43.9 |
| CDY23937 | Canola | mitochondrion | 88.46 | 41.6 |
| CDY34607 | Canola | cytosol | 30.77 | 39.44 |
| CDY35372 | Canola | cytosol | 18.68 | 34.69 |
| CDY40226 | Canola | cytosol | 19.23 | 33.65 |
| CDY72604 | Canola | extracellular | 53.3 | 32.99 |
| CDX84569 | Canola | mitochondrion | 47.8 | 32.95 |
| CDY17463 | Canola | cytosol | 50.0 | 30.54 |
| CDX78281 | Canola | cytosol | 52.75 | 30.0 |
| CDX73428 | Canola | cytosol, extracellular, plasma membrane | 52.2 | 29.69 |
| AT5G38570.1 | Thale cress | cytosol, nucleus, plasma membrane | 59.89 | 28.76 |
| CDY41221 | Canola | cytosol | 50.0 | 27.83 |
| CDY01651 | Canola | mitochondrion | 51.1 | 27.51 |
| CDX74515 | Canola | cytosol | 68.13 | 26.44 |
| CDX87839 | Canola | cytosol, endoplasmic reticulum, plastid | 61.54 | 26.42 |
| CDY32785 | Canola | cytosol | 51.1 | 25.2 |
| CDY67485 | Canola | cytosol | 50.0 | 25.14 |
| CDY52958 | Canola | cytosol | 28.02 | 25.12 |
| AT5G38565.1 | Thale cress | cytosol, peroxisome, plastid | 47.8 | 24.93 |
| CDY22729 | Canola | nucleus | 29.67 | 23.68 |
| CDY40225 | Canola | endoplasmic reticulum, extracellular | 50.0 | 23.27 |
| CDX73430 | Canola | extracellular, vacuole | 52.75 | 23.13 |
| CDX78279 | Canola | cytosol | 48.35 | 22.86 |
| CDY41224 | Canola | cytosol, plasma membrane | 51.65 | 22.76 |
| CDX78283 | Canola | extracellular, plasma membrane | 51.1 | 22.41 |
| CDX96200 | Canola | extracellular, plasma membrane | 51.1 | 22.41 |
| CDY40231 | Canola | cytosol | 50.55 | 21.9 |
| CDX79668 | Canola | cytosol | 42.31 | 21.81 |
| CDX78280 | Canola | extracellular, golgi, mitochondrion, plastid | 53.3 | 21.0 |
| CDX73431 | Canola | endoplasmic reticulum, plasma membrane | 47.25 | 20.67 |
| CDY48142 | Canola | cytosol | 21.98 | 20.3 |
| CDX73432 | Canola | extracellular, plasma membrane | 46.15 | 19.72 |
| CDY16725 | Canola | cytosol, extracellular, nucleus | 26.37 | 18.75 |
| CDY64738 | Canola | extracellular, nucleus, peroxisome | 29.67 | 17.36 |
| CDY38511 | Canola | cytosol | 32.42 | 14.39 |
| CDY55715 | Canola | cytosol, nucleus, plasma membrane | 32.42 | 14.39 |
| CDY53464 | Canola | cytosol | 31.87 | 14.22 |
| CDY47798 | Canola | plasma membrane | 32.97 | 14.12 |
| CDY09047 | Canola | cytosol | 33.52 | 13.53 |
| CDX91627 | Canola | cytosol | 23.63 | 13.23 |
| CDY27080 | Canola | cytosol | 23.63 | 12.65 |
| CDY66257 | Canola | mitochondrion | 29.67 | 12.56 |
| CDY22940 | Canola | plasma membrane | 35.71 | 7.68 |
| CDY41220 | Canola | cytosol | 2.2 | 2.52 |
| CDY40228 | Canola | cytosol, extracellular, nucleus | 0.55 | 0.81 |
Protein Annotations
| EnsemblPlants:CDX84780 | EnsemblPlantsGene:GSBRNA2T00142073001 | InterPro:FBD | PANTHER:PTHR32212 | PANTHER:PTHR32212:SF173 | PFAM:PF08387 |
| ProteinID:CDX84780 | ProteinID:CDX84780.1 | SMART:SM00579 | UniParc:UPI0004EEA11D | MapMan:35.1 | : |
Description
BnaA03g14500D
Coordinates
chrLK031838:+:1206009..1206869
Molecular Weight (calculated)
20913.4 Da
IEP (calculated)
8.834
GRAVY (calculated)
-0.363
Length
182 amino acids
Sequence
(BLAST)
(BLAST)
001: MPKLEEAYVD VVSSFLKSVI GSITSVKHLT ICSEISKSGG FVFNQLKHMK QCVCKENSSD LLGQLLKDSP NLRLLDISHM EDHGDDERNE MVCWNQPSPV
101: PECLLWSLQT LNWSRYFGRP QERDIAVYIL KHARRLKKAR IIADTQEHDV PNLKMITELA FSSRASSRCE LVFVKGPRVR RR
101: PECLLWSLQT LNWSRYFGRP QERDIAVYIL KHARRLKKAR IIADTQEHDV PNLKMITELA FSSRASSRCE LVFVKGPRVR RR
001: MYLMNMPNLR EAYVDVVSSD ILQYDGFDDG YVFNQLKHLN LCVCKEESSN LLGQLLKDSP NLRILDISVV KDHGTDERNG MVSWNQPNFV PECLLSSLQT
101: LLWSRYFGRQ QDRDIAVYIL KNACHLKTAT ILADTDEHDV PNLQMIKELA LSLRTSVICQ LVFVEYLN
101: LLWSRYFGRQ QDRDIAVYIL KNACHLKTAT ILADTDEHDV PNLQMIKELA LSLRTSVICQ LVFVEYLN
Arabidopsis Description
FBD-like domain family protein [Source:UniProtKB/TrEMBL;Acc:Q9FFW3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.