Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY68171 | Canola | cytosol | 17.29 | 73.03 |
| CDX67415 | Canola | cytosol | 69.15 | 68.06 |
| Bra028419.1-P | Field mustard | nucleus | 67.55 | 66.67 |
| CDY49072 | Canola | cytosol | 66.76 | 65.71 |
| CDY03596 | Canola | cytosol | 54.79 | 63.19 |
| Bra014247.1-P | Field mustard | nucleus | 49.47 | 61.59 |
| AT3G23280.1 | Thale cress | nucleus | 64.36 | 52.38 |
| KRH34390 | Soybean | cytosol | 53.72 | 44.3 |
| KRG92416 | Soybean | cytosol | 53.19 | 43.76 |
| VIT_05s0049g01160.t01 | Wine grape | nucleus | 56.91 | 42.8 |
| Solyc09g090160.2.1 | Tomato | nucleus | 56.91 | 42.71 |
| PGSC0003DMT400044357 | Potato | nucleus | 56.12 | 42.12 |
| TraesCS1B01G107100.1 | Wheat | cytosol | 47.87 | 35.02 |
| TraesCS1A01G088100.2 | Wheat | cytosol | 47.61 | 34.49 |
| Os07t0446100-01 | Rice | cytosol | 46.81 | 34.31 |
| Zm00001d019547_P002 | Maize | cytosol | 46.81 | 34.04 |
| HORVU1Hr1G019320.3 | Barley | cytosol | 48.14 | 33.96 |
| EER98436 | Sorghum | cytosol | 46.28 | 33.72 |
| HORVU3Hr1G065130.2 | Barley | cytosol | 44.68 | 32.88 |
| TraesCS1D01G089400.1 | Wheat | cytosol | 47.87 | 32.61 |
| GSMUA_Achr5P14580_001 | Banana | cytosol | 38.03 | 27.66 |
| GSMUA_Achr4P18160_001 | Banana | golgi, mitochondrion, nucleus, plastid | 38.3 | 23.68 |
Protein Annotations
| Gene3D:1.25.40.20 | MapMan:19.2.2.1.5.3.2 | Gene3D:3.30.40.10 | EntrezGene:827080 | ProteinID:AEE83429.1 | EMBL:AF325044 |
| ArrayExpress:AT4G14365 | EnsemblPlantsGene:AT4G14365 | RefSeq:AT4G14365 | TAIR:AT4G14365 | RefSeq:AT4G14365-TAIR-G | EnsemblPlants:AT4G14365.1 |
| TAIR:AT4G14365.1 | EMBL:AY062788 | EMBL:AY081602 | EMBL:AY087705 | InterPro:Ankyrin_rpt | InterPro:Ankyrin_rpt-contain_dom |
| InterPro:Ankyrin_rpt-contain_sf | ProteinID:CAB10215.1 | ProteinID:CAB78478.1 | EMBL:DQ086842 | GO:GO:0000151 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004842 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0031625 | GO:GO:0046872 |
| InterPro:IPR001841 | InterPro:IPR002110 | InterPro:IPR013083 | InterPro:IPR020683 | InterPro:IPR036770 | RefSeq:NP_567428.1 |
| PFAM:PF12796 | PFAM:PF13920 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025195 | PO:PO:0025281 | PFscan:PS50088 | PFscan:PS50089 | PFscan:PS50297 | PANTHER:PTHR44837 |
| PANTHER:PTHR44837:SF1 | UniProt:Q9FPH0 | SMART:SM00184 | SMART:SM00248 | SUPFAM:SSF48403 | SUPFAM:SSF57850 |
| UniParc:UPI00000A17A5 | Symbol:XBAT34 | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | : | : |
Description
XBAT34Putative E3 ubiquitin-protein ligase XBAT34 [Source:UniProtKB/Swiss-Prot;Acc:Q9FPH0]
Coordinates
chr4:-:8271270..8273903
Molecular Weight (calculated)
41385.0 Da
IEP (calculated)
7.946
GRAVY (calculated)
-0.254
Length
376 amino acids
Sequence
(BLAST)
(BLAST)
001: MGQQQSQSKD EMLFQEVSNN NVEGIKSLHH EGAGLEGVDK LGRTPLILAC TNDDLYDVAK TLLELGSNVN AYRSGCNGGT PLHHAAKRGL VHTVKLLLSH
101: GANPLVLDDD VKTALEVARD EGYSNVVRAI ESHICLFSGC MREYSGSSLL NLFAPQLLSR KVWVVVVPTG SRNPTKPLKL ELVLYDSIQD AQPRMVIPLW
201: KANLEEPKSF RCDDSVMIID DSRSPKSMRQ RRESGFISQA RRWAQVDRQI RLKLAAEIKG DMKQMNWFSE ACKGVPQPMN PPRFMKTSQA TTTTTNVPAL
301: SDDALTRVAM SLPSPKTANK EDGLCVICVD APSEAVCVPC GHVAGCISCL KEIENKKMGC PVCRANIDQV IKLYHV
101: GANPLVLDDD VKTALEVARD EGYSNVVRAI ESHICLFSGC MREYSGSSLL NLFAPQLLSR KVWVVVVPTG SRNPTKPLKL ELVLYDSIQD AQPRMVIPLW
201: KANLEEPKSF RCDDSVMIID DSRSPKSMRQ RRESGFISQA RRWAQVDRQI RLKLAAEIKG DMKQMNWFSE ACKGVPQPMN PPRFMKTSQA TTTTTNVPAL
301: SDDALTRVAM SLPSPKTANK EDGLCVICVD APSEAVCVPC GHVAGCISCL KEIENKKMGC PVCRANIDQV IKLYHV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.