Factsheet for Os07t0446100-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
plastid 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0196500-01
Os05t0200280-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G23280.1	Os01t0196500-01	AT3G13710.1	21798944
AT3G23280.1	Os05t0200280-01	AT3G13710.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G107100.1	Wheat	cytosol	77.0	76.85
TraesCS1A01G088100.2	Wheat	cytosol	76.22	75.34
HORVU1Hr1G019320.3	Barley	cytosol	76.61	73.73
EER98436	Sorghum	cytosol	73.88	73.45
Zm00001d019547_P002	Maize	cytosol	73.49	72.92
TraesCS1D01G089400.1	Wheat	cytosol	76.8	71.38
KRH34390	Soybean	cytosol	45.81	51.54
KRG92416	Soybean	cytosol	45.42	50.98
Bra014934.1-P	Field mustard	nucleus	44.44	50.89
CDY68171	Canola	cytosol	8.77	50.56
PGSC0003DMT400044357	Potato	nucleus	49.32	50.5
AT3G23280.1	Thale cress	nucleus	45.22	50.22
CDY71158	Canola	nucleus	32.94	50.15
Solyc09g090160.2.1	Tomato	nucleus	48.15	49.3
VIT_05s0049g01160.t01	Wine grape	nucleus	47.95	49.2
Bra028419.1-P	Field mustard	nucleus	36.06	48.56
VIT_12s0028g03750.t01	Wine grape	cytosol	46.98	48.49
HORVU3Hr1G065130.2	Barley	cytosol	47.95	48.14
CDY08992	Canola	cytosol	41.33	48.07
Bra014932.1-P	Field mustard	cytosol	33.33	48.03
CDX77533	Canola	cytosol	33.33	48.03
CDX85079	Canola	cytosol	33.14	47.75
CDY49072	Canola	cytosol	35.48	47.64
CDX67415	Canola	cytosol	35.48	47.64
GSMUA_Achr5P14580_001	Banana	cytosol	47.95	47.58
AT4G14365.1	Thale cress	cytosol	34.31	46.81
CDX85082	Canola	nucleus	44.64	44.73
CDY08997	Canola	cytosol	32.55	44.41
Bra014247.1-P	Field mustard	nucleus	25.34	43.05
CDY03596	Canola	cytosol	27.29	42.94
CDY62836	Canola	nucleus	33.33	41.4
GSMUA_Achr4P18160_001	Banana	golgi, mitochondrion, nucleus, plastid	47.95	40.46
PGSC0003DMT400028272	Potato	nucleus	43.08	39.25
Solyc06g008500.2.1	Tomato	cytosol	42.11	38.64
CDY35522	Canola	cytosol	36.45	33.33
Bra023739.1-P	Field mustard	vacuole	35.28	30.02

Protein Annotations

Gene3D:1.25.40.20	MapMan:19.2.2.1.5.3.2	Gene3D:3.30.40.10	EntrezGene:4343110	EMBL:AK100927	InterPro:Ankyrin_rpt
InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	ProteinID:BAC79949.1	ProteinID:BAC79950.1	ProteinID:BAF21449.1	ProteinID:BAT01291.1
GO:GO:0000151	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538
GO:GO:0031625	GO:GO:0046872	InterPro:IPR001841	InterPro:IPR002110	InterPro:IPR013083	InterPro:IPR020683
InterPro:IPR036770	EnsemblPlantsGene:Os07g0446100	EnsemblPlants:Os07t0446100-01	PFAM:PF00023	PFAM:PF13637	PFAM:PF13920
PFscan:PS50088	PFscan:PS50089	PFscan:PS50297	PANTHER:PTHR44837	PANTHER:PTHR44837:SF1	UniProt:Q7XI08
SMART:SM00184	SMART:SM00248	SUPFAM:SSF48403	SUPFAM:SSF57850	UniParc:UPI00001B3AB5	RefSeq:XP_015647431.1
InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:	:

Description

XBOS34Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os07t0446100-01);Similar to Protein binding protein. (Os07t0446100-02)

Coordinates

chr7:-:15237188..15243001

Molecular Weight (calculated)

54732.0 Da

IEP (calculated)

6.309

GRAVY (calculated)

-0.238

Length

513 amino acids

Sequence
(BLAST)

001: MGLQQSKEEL VYQQVNYGNA DGIRALRAQG AGLEWIDKEG KTPLMVASMR PDLINVVQVL IELGANVNAY RPGSYCGTAL HHAAKKGLEQ TVHLLLSHGA
101: NPFITNDDCH TALDLAREKG HVNVVRAIEG RISLFCGWMR ENYGPGFLEA FAPQFLTRKI WAVILPREAR NQTRPLKLEL TIYPELQASK PQAVIKLWKC
201: QLEEPKFNQA NPSVTIFDKG TRTRYKLLPV CEGDKQQLQW FYSACCGIPQ VASMVPAQPA NAPLPNPSSA SSLPSVISTP SKEDAELAMA INASILSAIA
301: EGVPDVQPIT TTTATNDWGN PPSNSLNGWG PPDTSAPSKT SGQVPVVTSS SSTYNGWDVP GTSSGQSSSK HNKSQNSTFV VPQEALPSLP VPTAPPLAVG
401: TFYDGPIQYP SIDSTPVDVT MPSADGGTAV SSAKPAENEG DAKPAESDAN ASNSGNTPPG TCVICLDAPV EGACIPCGHM AGCMSCLKDI ESKKWGCPIC
501: RAKINQIIRL YAV

Best Arabidopsis Sequence Match ( AT3G23280.2 )
(BLAST)

001: MGQQQSKGEL LYQQVSYGNS EGIRALHRDG GDLEWMDREG KTPLILACMN SELFDVAKTL IELGSNVNAY RPGRHAGTPL HHAAKRGLEN TVKLLLSHGA
101: NPLVLNDDCQ TPLEVARVKG FSNVVRAIEK HICLFSGWMR EFYGPTFLDL FAPQLLSRRV WVVIVPTGSR NPTKPFKLEL VVYASLQDAQ PRTVMPLWKA
201: NLEEPKAKQS DTSVMIVDNS TKTRLKFAPS TEGDSQQLKW FCDACKGIPQ PMHPPVFLQA PPSAPPPPSE DGLAMGMNAS LHTTMSDPSN LNHHSIGQAS
301: SSSGPSSSTA PPSGKASAFG FNSHGIGIVL ESSPSAPPLT DDDIATVDDG PIHYPSIDST PVDLPSAASL PASTEGERKE DGNTGTCAIC LDAPSEAVCV
401: PCGHVAGCMS CLKEIKSKNW GCPVCRAKID QVIKLYRV

Arabidopsis Description

XBAT35Putative E3 ubiquitin-protein ligase XBAT35 [Source:UniProtKB/Swiss-Prot;Acc:Q4FE47]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.