CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY49072	Canola	cytosol	95.81	95.81
CDY03596	Canola	cytosol	68.85	80.67
CDY68171	Canola	cytosol	18.06	77.53
AT4G14365.1	Thale cress	cytosol	68.06	69.15
CDY71158	Canola	nucleus	56.54	64.09
CDX77533	Canola	cytosol	51.57	55.34
CDX85079	Canola	cytosol	51.57	55.34
CDY08992	Canola	cytosol	61.52	53.29
CDX85082	Canola	nucleus	68.32	50.98
CDY08997	Canola	cytosol	46.07	46.81
CDY62836	Canola	nucleus	50.26	46.49
KRG92416	Soybean	cytosol	53.4	44.64
KRH34390	Soybean	cytosol	53.14	44.52
VIT_05s0049g01160.t01	Wine grape	nucleus	57.85	44.2
Solyc09g090160.2.1	Tomato	nucleus	57.59	43.91
PGSC0003DMT400044357	Potato	nucleus	56.81	43.31
TraesCS1B01G107100.1	Wheat	cytosol	48.17	35.8
CDY35522	Canola	cytosol	52.36	35.65
Os07t0446100-01	Rice	cytosol	47.64	35.48
TraesCS1A01G088100.2	Wheat	cytosol	47.91	35.26
Zm00001d019547_P002	Maize	cytosol	47.38	35.01
HORVU1Hr1G019320.3	Barley	cytosol	48.69	34.9
EER98436	Sorghum	cytosol	46.6	34.5
TraesCS1D01G089400.1	Wheat	cytosol	48.17	33.33
HORVU3Hr1G065130.2	Barley	cytosol	43.72	32.68
GSMUA_Achr5P14580_001	Banana	cytosol	39.01	28.82
GSMUA_Achr4P18160_001	Banana	golgi, mitochondrion, nucleus, plastid	40.84	25.66

Protein Annotations

Gene3D:1.25.40.20	MapMan:19.2.2.1.5.3.2	Gene3D:3.30.40.10	GO:A0A078BS29	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	EnsemblPlants:CDX67415	ProteinID:CDX67415	ProteinID:CDX67415.1	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00098505001	InterPro:IPR001841	InterPro:IPR002110	InterPro:IPR013083	InterPro:IPR020683
InterPro:IPR036770	PFAM:PF00023	PFAM:PF12796	PFAM:PF13920	PFscan:PS50088	PFscan:PS50089
PFscan:PS50297	PANTHER:PTHR44837	PANTHER:PTHR44837:SF1	SMART:SM00248	SUPFAM:SSF48403	SUPFAM:SSF57850
UniParc:UPI0004EED7C1	InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:

Description

BnaA07g14550D

Coordinates

chrLK031787:+:106442..108686

Molecular Weight (calculated)

42005.4 Da

IEP (calculated)

7.984

GRAVY (calculated)

-0.245

Length

382 amino acids

Sequence
(BLAST)

001: MGQQQFKDEV LFQQVSQNDV EGIKSLRHEG AGLEWSDKEG RTPLILACAN AKLYDVAETL LELGSNVNAY GSGCNAGTPL HHAAKRGLEN TVKLLLSHGA
101: NPLALNDDFQ TPLDVARDNG HSDVVRAIES HICLFSGWMR QFYGTSFQEL FSPQLLSRRV WVVVVPTSSG NPSKPLKLEL VVYASLQDAQ PITVMPLWKA
201: KLEEPRSDQS DASVMIIDNS SKRKKQRRRG YISHARRWAQ VDRQMRLKLA AATKGDIKQL NWFCEACKGT PQPMNLPMFL QTTEKIISNE LTPSVPLLRA
301: AVEVEDGSVH YPSFPSTNFE SKEGSGGSGV CVICVDASSE AACVPCGHVA GCISCLKEIK NKKLGCPICR ASIDQVIKLY HV

Best Arabidopsis Sequence Match ( AT4G14365.1 )
(BLAST)

001: MGQQQSQSKD EMLFQEVSNN NVEGIKSLHH EGAGLEGVDK LGRTPLILAC TNDDLYDVAK TLLELGSNVN AYRSGCNGGT PLHHAAKRGL VHTVKLLLSH
101: GANPLVLDDD VKTALEVARD EGYSNVVRAI ESHICLFSGC MREYSGSSLL NLFAPQLLSR KVWVVVVPTG SRNPTKPLKL ELVLYDSIQD AQPRMVIPLW
201: KANLEEPKSF RCDDSVMIID DSRSPKSMRQ RRESGFISQA RRWAQVDRQI RLKLAAEIKG DMKQMNWFSE ACKGVPQPMN PPRFMKTSQA TTTTTNVPAL
301: SDDALTRVAM SLPSPKTANK EDGLCVICVD APSEAVCVPC GHVAGCISCL KEIENKKMGC PVCRANIDQV IKLYHV

Arabidopsis Description

XBAT34Putative E3 ubiquitin-protein ligase XBAT34 [Source:UniProtKB/Swiss-Prot;Acc:Q9FPH0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.