Factsheet for Zm00001d019547_P002

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d037747_P001
Zm00001d039455_P002

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G23280.1	Zm00001d037747_P001	AT3G13710.1	21798944
AT3G23280.1	Zm00001d039455_P002	AT3G13710.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER98436	Sorghum	cytosol	91.68	91.86
Os07t0446100-01	Rice	cytosol	72.92	73.49
TraesCS1B01G107100.1	Wheat	cytosol	71.95	72.37
TraesCS1A01G088100.2	Wheat	cytosol	71.37	71.1
HORVU1Hr1G019320.3	Barley	cytosol	71.95	69.79
TraesCS1D01G089400.1	Wheat	cytosol	72.53	67.93
CDY68171	Canola	cytosol	9.86	57.3
KRH34390	Soybean	cytosol	45.26	51.32
KRG92416	Soybean	cytosol	44.68	50.55
CDY71158	Canola	nucleus	32.5	49.85
PGSC0003DMT400044357	Potato	nucleus	48.16	49.7
Bra014934.1-P	Field mustard	nucleus	42.75	49.33
VIT_05s0049g01160.t01	Wine grape	nucleus	47.58	49.2
AT3G23280.1	Thale cress	nucleus	43.91	49.13
Solyc09g090160.2.1	Tomato	nucleus	47.0	48.5
HORVU3Hr1G065130.2	Barley	cytosol	47.78	48.34
VIT_12s0028g03750.t01	Wine grape	cytosol	46.03	47.89
Bra028419.1-P	Field mustard	nucleus	35.01	47.51
CDX67415	Canola	cytosol	35.01	47.38
CDY49072	Canola	cytosol	34.62	46.86
AT4G14365.1	Thale cress	cytosol	34.04	46.81
CDY08992	Canola	cytosol	39.65	46.49
GSMUA_Achr5P14580_001	Banana	cytosol	46.42	46.42
CDX77533	Canola	cytosol	31.72	46.07
CDX85079	Canola	cytosol	31.53	45.79
Bra014932.1-P	Field mustard	cytosol	31.53	45.79
CDY08997	Canola	cytosol	32.11	44.15
CDX85082	Canola	nucleus	42.94	43.36
CDY03596	Canola	cytosol	26.89	42.64
Bra014247.1-P	Field mustard	nucleus	24.18	41.39
CDY62836	Canola	nucleus	31.91	39.95
GSMUA_Achr4P18160_001	Banana	golgi, mitochondrion, nucleus, plastid	46.62	39.64
PGSC0003DMT400028272	Potato	nucleus	41.78	38.37
Solyc06g008500.2.1	Tomato	cytosol	39.85	36.85
CDY35522	Canola	cytosol	34.43	31.73
Bra023739.1-P	Field mustard	vacuole	33.85	29.02

Protein Annotations

Gene3D:1.25.40.20	EntrezGene:100191485	MapMan:19.2.2.1.5.3.2	Gene3D:3.30.40.10	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	UniProt:B4F8Z4	EMBL:BT033582	EMBL:BT067910	EMBL:EU971215	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0016874	InterPro:IPR001841	InterPro:IPR002110
InterPro:IPR013083	InterPro:IPR020683	InterPro:IPR036770	ProteinID:ONM53167.1	PFAM:PF00023	PFAM:PF13637
PFAM:PF13920	PFscan:PS50088	PFscan:PS50089	PFscan:PS50297	PANTHER:PTHR44837	PANTHER:PTHR44837:SF1
SMART:SM00184	SMART:SM00248	SUPFAM:SSF48403	SUPFAM:SSF57850	UniParc:UPI00017B617B	EnsemblPlantsGene:Zm00001d019547
EnsemblPlants:Zm00001d019547_P002	EnsemblPlants:Zm00001d019547_T002	InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:

Description

Putative E3 ubiquitin-protein ligase XBAT35

Coordinates

chr7:-:41808796..41814005

Molecular Weight (calculated)

55402.0 Da

IEP (calculated)

6.652

GRAVY (calculated)

-0.257

Length

517 amino acids

Sequence
(BLAST)

001: MGLQQSKEEL LYQQVNYGNV DGIRTLRGQG AGLEWIDKEG KTPLMLACMR PDLFDVAKVL IELGANVNAY RPGSHCGTAL HHAAKKGLQQ TVHLLLSHGA
101: NPFIPNDDCN TALELAREKG HVNVVRAIEG RLCLFCGWMR ENYAPAFLDA IAPQFMTRKI WAVVLPREVR TPTRPLKLEI AIYPELQASK PRSVLKLWKC
201: QIEQPKLNQA DPSIIIFDKG TKTRYKILPA YEGDKQQLQW FYNACCGMAQ VLNTAPVAPA NLPMPNPAPA ISSVAPSEQS APSKEDVELA MAINASIQSA
301: IAEGVSVPNV QPNASTPNNN GWAAPPSNSH NGWGPPATPA PSKTSGQSQV RVDAPSSSTY NGWDVPGTSS SQSSSKPHQT QTNPPVLIPQ EALQALPTPT
401: APPFAEETFY NGPVHYPSID STPVDVTMPA TTGGGSTTVI ATAAPTEQLE NEADASDSGK TPSGTCVICL DAPVEGACIP CGHMAGCMSC LKDIESKKWG
501: CPICRATINQ VVRLYAV

Best Arabidopsis Sequence Match ( AT3G23280.2 )
(BLAST)

001: MGQQQSKGEL LYQQVSYGNS EGIRALHRDG GDLEWMDREG KTPLILACMN SELFDVAKTL IELGSNVNAY RPGRHAGTPL HHAAKRGLEN TVKLLLSHGA
101: NPLVLNDDCQ TPLEVARVKG FSNVVRAIEK HICLFSGWMR EFYGPTFLDL FAPQLLSRRV WVVIVPTGSR NPTKPFKLEL VVYASLQDAQ PRTVMPLWKA
201: NLEEPKAKQS DTSVMIVDNS TKTRLKFAPS TEGDSQQLKW FCDACKGIPQ PMHPPVFLQA PPSAPPPPSE DGLAMGMNAS LHTTMSDPSN LNHHSIGQAS
301: SSSGPSSSTA PPSGKASAFG FNSHGIGIVL ESSPSAPPLT DDDIATVDDG PIHYPSIDST PVDLPSAASL PASTEGERKE DGNTGTCAIC LDAPSEAVCV
401: PCGHVAGCMS CLKEIKSKNW GCPVCRAKID QVIKLYRV

Arabidopsis Description

XBAT35Putative E3 ubiquitin-protein ligase XBAT35 [Source:UniProtKB/Swiss-Prot;Acc:Q4FE47]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.