CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY03596	Canola	cytosol	95.51	26.07
Bra014247.1-P	Field mustard	nucleus	68.54	20.2
CDX67415	Canola	cytosol	77.53	18.06
CDY71158	Canola	nucleus	66.29	17.51
AT4G14365.1	Thale cress	cytosol	73.03	17.29
CDY49072	Canola	cytosol	74.16	17.28
CDX77533	Canola	cytosol	58.43	14.61
CDX85079	Canola	cytosol	58.43	14.61
CDY08992	Canola	cytosol	64.04	12.93
Solyc09g090160.2.1	Tomato	nucleus	68.54	12.18
PGSC0003DMT400044357	Potato	nucleus	67.42	11.98
CDY08997	Canola	cytosol	50.56	11.97
KRG92416	Soybean	cytosol	60.67	11.82
VIT_05s0049g01160.t01	Wine grape	nucleus	65.17	11.6
CDX85082	Canola	nucleus	66.29	11.52
KRH34390	Soybean	cytosol	58.43	11.4
Zm00001d019547_P002	Maize	cytosol	57.3	9.86
HORVU3Hr1G065130.2	Barley	cytosol	53.93	9.39
TraesCS1B01G107100.1	Wheat	cytosol	53.93	9.34
EER98436	Sorghum	cytosol	53.93	9.3
GSMUA_Achr5P14580_001	Banana	cytosol	53.93	9.28
TraesCS1A01G088100.2	Wheat	cytosol	53.93	9.25
HORVU1Hr1G019320.3	Barley	cytosol	53.93	9.01
Os07t0446100-01	Rice	cytosol	50.56	8.77
TraesCS1D01G089400.1	Wheat	cytosol	53.93	8.7
GSMUA_Achr4P18160_001	Banana	golgi, mitochondrion, nucleus, plastid	57.3	8.39
CDY62836	Canola	nucleus	34.83	7.51
CDY35522	Canola	cytosol	44.94	7.13

Protein Annotations

EnsemblPlants:CDY68171	EnsemblPlantsGene:GSBRNA2T00070012001	Gene3D:1.25.40.20	InterPro:Ankyrin_rpt-contain_sf	InterPro:IPR036770	PANTHER:PTHR44837
ProteinID:CDY68171	ProteinID:CDY68171.1	SUPFAM:SSF48403	UniParc:UPI0004EEF203	UniProt:A0A078JR73	MapMan:35.1

Description

BnaAnng26330DBnaAnng26330D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JR73]

Coordinates

chrLK036931:-:5612..6099

Molecular Weight (calculated)

10098.0 Da

IEP (calculated)

5.143

GRAVY (calculated)

-0.425

Length

89 amino acids

Sequence
(BLAST)

1: MGQQQLKDEM LFQKVNHNDV ESIKSHCHEG AGLEWADKEG RTPLILACAE TELYDVAETL KVARAKGYSD TVRAIESRIC LFSGWMREL

Best Arabidopsis Sequence Match ( AT4G14365.1 )
(BLAST)

001: MGQQQSQSKD EMLFQEVSNN NVEGIKSLHH EGAGLEGVDK LGRTPLILAC TNDDLYDVAK TLLELGSNVN AYRSGCNGGT PLHHAAKRGL VHTVKLLLSH
101: GANPLVLDDD VKTALEVARD EGYSNVVRAI ESHICLFSGC MREYSGSSLL NLFAPQLLSR KVWVVVVPTG SRNPTKPLKL ELVLYDSIQD AQPRMVIPLW
201: KANLEEPKSF RCDDSVMIID DSRSPKSMRQ RRESGFISQA RRWAQVDRQI RLKLAAEIKG DMKQMNWFSE ACKGVPQPMN PPRFMKTSQA TTTTTNVPAL
301: SDDALTRVAM SLPSPKTANK EDGLCVICVD APSEAVCVPC GHVAGCISCL KEIENKKMGC PVCRANIDQV IKLYHV

Arabidopsis Description

XBAT34Putative E3 ubiquitin-protein ligase XBAT34 [Source:UniProtKB/Swiss-Prot;Acc:Q9FPH0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.