Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra014934.1-P | Field mustard | nucleus | 79.22 | 81.7 |
| CDY71158 | Canola | nucleus | 59.52 | 81.6 |
| CDY08992 | Canola | cytosol | 69.26 | 72.56 |
| CDX85082 | Canola | nucleus | 79.44 | 71.68 |
| AT4G14365.1 | Thale cress | cytosol | 52.38 | 64.36 |
| CDX85079 | Canola | cytosol | 48.05 | 62.36 |
| CDX77533 | Canola | cytosol | 47.84 | 62.08 |
| Bra014932.1-P | Field mustard | cytosol | 47.62 | 61.8 |
| CDY08997 | Canola | cytosol | 49.78 | 61.17 |
| CDY62836 | Canola | nucleus | 53.25 | 59.56 |
| VIT_05s0049g01160.t01 | Wine grape | nucleus | 61.69 | 57.0 |
| KRH34390 | Soybean | cytosol | 54.98 | 55.7 |
| KRG92416 | Soybean | cytosol | 54.55 | 55.14 |
| PGSC0003DMT400044357 | Potato | nucleus | 58.87 | 54.29 |
| Solyc09g090160.2.1 | Tomato | nucleus | 58.87 | 54.29 |
| CDY35522 | Canola | cytosol | 59.96 | 49.38 |
| Bra023739.1-P | Field mustard | vacuole | 60.39 | 46.27 |
| Os07t0446100-01 | Rice | cytosol | 50.22 | 45.22 |
| EER98436 | Sorghum | cytosol | 50.22 | 44.96 |
| TraesCS1B01G107100.1 | Wheat | cytosol | 49.78 | 44.75 |
| TraesCS1A01G088100.2 | Wheat | cytosol | 49.57 | 44.12 |
| Zm00001d019547_P002 | Maize | cytosol | 49.13 | 43.91 |
| HORVU1Hr1G019320.3 | Barley | cytosol | 50.0 | 43.34 |
| TraesCS1D01G089400.1 | Wheat | cytosol | 50.0 | 41.85 |
| HORVU3Hr1G065130.2 | Barley | cytosol | 41.77 | 37.77 |
| GSMUA_Achr5P14580_001 | Banana | cytosol | 40.91 | 36.56 |
| GSMUA_Achr4P18160_001 | Banana | golgi, mitochondrion, nucleus, plastid | 42.21 | 32.07 |
Protein Annotations
| Gene3D:1.25.40.20 | MapMan:19.2.2.1.5.3.2 | Gene3D:3.30.40.10 | EntrezGene:821907 | ProteinID:AEE76746.1 | ProteinID:AEE76747.1 |
| ArrayExpress:AT3G23280 | EnsemblPlantsGene:AT3G23280 | RefSeq:AT3G23280 | TAIR:AT3G23280 | RefSeq:AT3G23280-TAIR-G | EnsemblPlants:AT3G23280.1 |
| TAIR:AT3G23280.1 | EMBL:AY045637 | EMBL:AY059650 | EMBL:AY088137 | InterPro:Ankyrin_rpt | InterPro:Ankyrin_rpt-contain_dom |
| InterPro:Ankyrin_rpt-contain_sf | Unigene:At.26166 | ProteinID:BAA95741.1 | EMBL:DQ086844 | GO:GO:0000151 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004842 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0031625 | GO:GO:0046872 |
| InterPro:IPR001841 | InterPro:IPR002110 | InterPro:IPR013083 | InterPro:IPR020683 | InterPro:IPR036770 | RefSeq:NP_566724.1 |
| RefSeq:NP_850628.1 | PFAM:PF00023 | PFAM:PF13920 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 |
| PFscan:PS50088 | PFscan:PS50089 | PFscan:PS50297 | PANTHER:PTHR44837 | PANTHER:PTHR44837:SF1 | UniProt:Q4FE47 |
| SMART:SM00184 | SMART:SM00248 | SUPFAM:SSF48403 | SUPFAM:SSF57850 | UniParc:UPI00001634F2 | Symbol:XBAT35 |
| InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | SEG:seg | : | : | : |
Description
XBAT35Putative E3 ubiquitin-protein ligase XBAT35 [Source:UniProtKB/Swiss-Prot;Acc:Q4FE47]
Coordinates
chr3:+:8321329..8324477
Molecular Weight (calculated)
50057.9 Da
IEP (calculated)
8.100
GRAVY (calculated)
-0.329
Length
462 amino acids
Sequence
(BLAST)
(BLAST)
001: MGQQQSKGEL LYQQVSYGNS EGIRALHRDG GDLEWMDREG KTPLILACMN SELFDVAKTL IELGSNVNAY RPGRHAGTPL HHAAKRGLEN TVKLLLSHGA
101: NPLVLNDDCQ TPLEVARVKG FSNVVRAIEK HICLFSGWMR EFYGPTFLDL FAPQLLSRRV WVVIVPTGSR NPTKPFKLEL VVYASLQDAQ PRTVMPLWKA
201: NLEEPKAKQS DTSVMIVDNS TIPSRRMKKR RVCASHGRRR PQVVRQTRLK FAPSTEGDSQ QLKWFCDACK GIPQPMHPPV FLQAPPSAPP PPSEDGLAMG
301: MNASLHTTMS DPSNLNHHSI GQASSSSGPS SSTAPPSGKA SAFGFNSHGI GIVLESSPSA PPLTDDDIAT VDDGPIHYPS IDSTPVDLPS AASLPASTEG
401: ERKEDGNTGT CAICLDAPSE AVCVPCGHVA GCMSCLKEIK SKNWGCPVCR AKIDQVIKLY RV
101: NPLVLNDDCQ TPLEVARVKG FSNVVRAIEK HICLFSGWMR EFYGPTFLDL FAPQLLSRRV WVVIVPTGSR NPTKPFKLEL VVYASLQDAQ PRTVMPLWKA
201: NLEEPKAKQS DTSVMIVDNS TIPSRRMKKR RVCASHGRRR PQVVRQTRLK FAPSTEGDSQ QLKWFCDACK GIPQPMHPPV FLQAPPSAPP PPSEDGLAMG
301: MNASLHTTMS DPSNLNHHSI GQASSSSGPS SSTAPPSGKA SAFGFNSHGI GIVLESSPSA PPLTDDDIAT VDDGPIHYPS IDSTPVDLPS AASLPASTEG
401: ERKEDGNTGT CAICLDAPSE AVCVPCGHVA GCMSCLKEIK SKNWGCPVCR AKIDQVIKLY RV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.