Factsheet for AT4G19006.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra020980.1-P	Field mustard	cytosol	83.37	94.82
CDX76502	Canola	cytosol	83.37	94.82
CDY69914	Canola	cytosol, extracellular	82.92	94.3
AT5G45620.1	Thale cress	cytosol	82.23	93.52
VIT_02s0012g02660.t01	Wine grape	cytosol	74.94	85.23
KRH39622	Soybean	cytosol	73.8	83.94
KRH74300	Soybean	cytosol	73.35	83.42
PGSC0003DMT400062813	Potato	cytosol	73.12	83.16
Solyc05g053140.2.1	Tomato	cytosol, endoplasmic reticulum, nucleus	72.67	82.64
PGSC0003DMT400069954	Potato	cytosol	72.67	82.64
Solyc09g090720.2.1	Tomato	cytosol, nucleus	71.98	81.87
GSMUA_Achr7P06760_001	Banana	cytosol, nucleus, plastid	35.76	78.5
GSMUA_Achr2P09740_001	Banana	cytoskeleton, cytosol, peroxisome	68.56	77.78
GSMUA_Achr5P03630_001	Banana	cytosol	68.34	77.52
Os03t0214600-01	Rice	cytosol	67.65	77.14
Zm00001d014436_P001	Maize	cytosol	67.2	76.62
Os01t0511300-01	Rice	cytosol, plasma membrane	66.29	75.58
HORVU2Hr1G102810.3	Barley	cytosol	64.46	73.13
TraesCS1B01G210900.1	Wheat	cytosol, golgi	60.14	68.57
TraesCS1D01G199700.1	Wheat	cytosol	60.14	68.57
TraesCS1A01G196300.1	Wheat	cytosol, golgi	59.91	68.31
Zm00001d030126_P002	Maize	endoplasmic reticulum, golgi, vacuole	66.97	66.67
HORVU1Hr1G051120.1	Barley	cytosol	35.76	65.15
Zm00001d002455_P001	Maize	cytosol, golgi	48.97	64.37
HORVU2Hr1G034690.3	Barley	mitochondrion	59.91	62.17
TraesCS1B01G327800.1	Wheat	mitochondrion	29.39	54.89
OQU82238	Sorghum	extracellular	17.08	44.64

Protein Annotations

Gene3D:1.25.40.570	MapMan:19.2.6.2.2.8	EntrezGene:827638	UniProt:A0A1P8B6G3	ProteinID:ANM67183.1	ArrayExpress:AT4G19006
EnsemblPlantsGene:AT4G19006	RefSeq:AT4G19006	TAIR:AT4G19006	RefSeq:AT4G19006-TAIR-G	EnsemblPlants:AT4G19006.2	Unigene:At.21756
GO:GO:0000502	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	InterPro:IPR000717	RefSeq:NP_001329027.1
InterPro:PCI_dom	PFscan:PS50250	InterPro:PSMD13	PANTHER:PTHR10539	PANTHER:PTHR10539:SF2	UniParc:UPI0008487E49
SEG:seg	:	:	:	:	:

Description

Proteasome component (PCI) domain protein [Source:TAIR;Acc:AT4G19006]

Coordinates

chr4:-:10409148..10411467

Molecular Weight (calculated)

50190.5 Da

IEP (calculated)

5.206

GRAVY (calculated)

-0.014

Length

439 amino acids

Sequence
(BLAST)

001: MAALQYLESQ KNAHPELGEW YNSLADLYQK KLWHQLTLKL EQFIALSVFQ AGDALIQLYN NFITDFETRI NLLKLAHFAV VVSRQYPEKE AAVSYLEGVI
101: EKLKATKESR INEPISYIET QIALFKLEQG DQKECKKILD DGKSLLDSMT DIDPSVYANF FWVSSQYHKV RQEFSEFYKN ALLYLAYTSV DSLSESFKLD
201: LAFDLSLSAL LGENIYNFGE LLAHPILKSL LGTNVEWLYH ILQAFNHGDL VQYQELCRVH NASLSAQPAL VENEKKLLEK INILCLIEII FSRPAEDRTI
301: PLSVIAERTK LSIEDVEHLL MKSLSVSTFF FPLSFSLSHS ISNIKNLKKI GKTQTRNLLE CVILYWLIVK TEENELLQVH LIEGILDQVN GTVYVSWAQP
401: RVLGIPQIKS LRDQLDSWVD KVHTTLLSVE AETPDLVAA

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.