Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra013863.1-P | Field mustard | cytosol | 93.4 | 93.4 |
| CDY34342 | Canola | cytosol | 93.4 | 92.96 |
| CDY03380 | Canola | cytosol | 90.57 | 92.31 |
| CDY11055 | Canola | cytosol | 89.62 | 87.96 |
| CDX92676 | Canola | cytosol | 88.21 | 86.57 |
| Solyc06g048420.1.1 | Tomato | cytosol | 49.06 | 65.0 |
| Solyc06g048410.2.1 | Tomato | plastid | 73.11 | 62.25 |
| KRH34597 | Soybean | cytosol, nucleus | 71.23 | 61.89 |
| KRG92190 | Soybean | cytosol | 72.17 | 61.69 |
| PGSC0003DMT400070920 | Potato | extracellular, plastid | 71.23 | 59.92 |
| Solyc03g095180.2.1 | Tomato | plastid | 70.75 | 49.51 |
| PGSC0003DMT400013447 | Potato | cytosol, extracellular, plastid | 70.75 | 49.51 |
| VIT_16s0013g00260.t01 | Wine grape | plastid | 69.81 | 48.37 |
| KRH70390 | Soybean | plastid | 68.87 | 46.5 |
| AT5G51100.1 | Thale cress | plastid | 66.04 | 45.9 |
| KRH33343 | Soybean | plastid | 66.98 | 45.81 |
| AT5G23310.1 | Thale cress | plastid | 53.77 | 43.35 |
| GSMUA_Achr11P... | Banana | plastid | 56.6 | 39.87 |
| AT3G10920.1 | Thale cress | mitochondrion | 31.13 | 28.57 |
| KXG19156 | Sorghum | plastid | 48.58 | 26.28 |
| AT3G56350.1 | Thale cress | extracellular | 29.72 | 26.14 |
| Os06t0115400-01 | Rice | plastid | 48.11 | 26.09 |
| TraesCS7D01G043000.1 | Wheat | plastid | 47.17 | 25.51 |
| TraesCS4A01G434000.1 | Wheat | plastid | 46.23 | 25.06 |
| TraesCS7A01G048600.1 | Wheat | mitochondrion | 46.23 | 24.94 |
| HORVU7Hr1G008390.6 | Barley | plastid | 46.7 | 24.03 |
Protein Annotations
| Gene3D:1.10.287.990 | MapMan:10.2.2.1 | Gene3D:2.40.500.20 | EntrezGene:828613 | ProteinID:AEE85007.1 | ProteinID:AEE85008.1 |
| ProteinID:AEE85009.1 | ProteinID:AEE85010.1 | ProteinID:AEE85011.1 | EMBL:AF324711 | EMBL:AF326862 | EMBL:AF339685 |
| ArrayExpress:AT4G25100 | EnsemblPlantsGene:AT4G25100 | RefSeq:AT4G25100 | TAIR:AT4G25100 | RefSeq:AT4G25100-TAIR-G | EnsemblPlants:AT4G25100.2 |
| TAIR:AT4G25100.2 | EMBL:AY039560 | EMBL:AY087220 | EMBL:AY129470 | Unigene:At.22638 | ProteinID:CAB36752.1 |
| ProteinID:CAB79419.1 | Symbol:FSD1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004784 | GO:GO:0005488 |
| GO:GO:0005507 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005739 | GO:GO:0005886 | GO:GO:0006801 | GO:GO:0006950 | GO:GO:0006979 | GO:GO:0007623 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009570 | GO:GO:0009579 |
| GO:GO:0009628 | GO:GO:0009642 | GO:GO:0009941 | GO:GO:0009987 | GO:GO:0010193 | GO:GO:0016020 |
| GO:GO:0016491 | GO:GO:0019430 | GO:GO:0019904 | GO:GO:0031969 | GO:GO:0046686 | GO:GO:0046688 |
| GO:GO:0046872 | GO:GO:0055114 | InterPro:IPR036314 | InterPro:IPR036324 | EMBL:M55910 | InterPro:Mn/Fe_SOD |
| InterPro:Mn/Fe_SOD_BS | InterPro:Mn/Fe_SOD_C | InterPro:Mn/Fe_SOD_N | InterPro:Mn/Fe_SOD_N_sf | RefSeq:NP_001031710.1 | RefSeq:NP_001190834.1 |
| RefSeq:NP_194240.1 | RefSeq:NP_849440.1 | RefSeq:NP_849441.1 | UniProt:P21276 | PFAM:PF00081 | PFAM:PF02777 |
| PIRSF:PIRSF000349 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001081 | PO:PO:0001170 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007131 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR01703 | ScanProsite:PS00088 | PANTHER:PTHR42769 | PANTHER:PTHR42769:SF8 |
| InterPro:SOD_C_sf | SUPFAM:SSF46609 | SUPFAM:SSF54719 | UniParc:UPI00000ABDB9 | SEG:seg | : |
Description
FSD1Superoxide dismutase [Fe] 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P21276]
Coordinates
chr4:-:12884300..12886902
Molecular Weight (calculated)
23792.1 Da
IEP (calculated)
6.515
GRAVY (calculated)
-0.291
Length
212 amino acids
Sequence
(BLAST)
(BLAST)
001: MAASSAVTAN YVLKPPPFAL DALEPHMSKQ TLEFHWGKHH RAYVDNLKKQ VLGTELEGKP LEHIIHSTYN NGDLLPAFNN AAQAWNHEFF WESMKPGGGG
101: KPSGELLALL ERDFTSYEKF YEEFNAAAAT QFGAGWAWLA YSNEKLKVVK TPNAVNPLVL GSFPLLTIDV WEHAYYLDFQ NRRPDYIKTF MTNLVSWEAV
201: SARLEAAKAA SA
101: KPSGELLALL ERDFTSYEKF YEEFNAAAAT QFGAGWAWLA YSNEKLKVVK TPNAVNPLVL GSFPLLTIDV WEHAYYLDFQ NRRPDYIKTF MTNLVSWEAV
201: SARLEAAKAA SA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.