Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- endoplasmic reticulum 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra029190.1-P | Field mustard | mitochondrion | 74.43 | 84.07 |
| CDY32644 | Canola | plastid | 75.74 | 77.0 |
| CDY38848 | Canola | plastid | 75.41 | 76.92 |
| AT4G25100.2 | Thale cress | plastid | 45.9 | 66.04 |
| KRH34597 | Soybean | cytosol, nucleus | 51.15 | 63.93 |
| CDY05836 | Canola | cytosol | 45.25 | 63.89 |
| Solyc06g048410.2.1 | Tomato | plastid | 50.16 | 61.45 |
| KRG92190 | Soybean | cytosol | 49.84 | 61.29 |
| PGSC0003DMT400070920 | Potato | extracellular, plastid | 50.16 | 60.71 |
| Solyc06g048420.1.1 | Tomato | cytosol | 30.82 | 58.75 |
| PGSC0003DMT400013447 | Potato | cytosol, extracellular, plastid | 58.36 | 58.75 |
| Solyc03g095180.2.1 | Tomato | plastid | 58.03 | 58.42 |
| Bra035724.1-P | Field mustard | cytosol | 41.64 | 57.47 |
| VIT_16s0013g00260.t01 | Wine grape | plastid | 56.07 | 55.88 |
| KRH70390 | Soybean | plastid | 57.05 | 55.41 |
| KRH33343 | Soybean | plastid | 54.75 | 53.87 |
| GSMUA_Achr11P... | Banana | plastid | 51.8 | 52.49 |
| AT5G23310.1 | Thale cress | plastid | 39.67 | 46.01 |
| AT3G10920.1 | Thale cress | mitochondrion | 25.25 | 33.33 |
| Os06t0115400-01 | Rice | plastid | 40.66 | 31.71 |
| TraesCS4A01G434000.1 | Wheat | plastid | 40.0 | 31.2 |
| TraesCS7D01G043000.1 | Wheat | plastid | 39.67 | 30.87 |
| KXG19156 | Sorghum | plastid | 39.34 | 30.61 |
| TraesCS7A01G048600.1 | Wheat | mitochondrion | 39.34 | 30.53 |
| AT3G56350.1 | Thale cress | extracellular | 23.61 | 29.88 |
| HORVU7Hr1G008390.6 | Barley | plastid | 40.0 | 29.61 |
| CDY70727 | Canola | mitochondrion | 25.57 | 27.96 |
| Zm00001d038235_P001 | Maize | cytosol | 0.98 | 20.0 |
Protein Annotations
| Gene3D:1.10.287.990 | MapMan:10.2.2.1 | MapMan:15.6.1.2.2.9 | Gene3D:2.40.500.20 | EntrezGene:835183 | ProteinID:AED96034.1 |
| EMBL:AK228538 | ArrayExpress:AT5G51100 | EnsemblPlantsGene:AT5G51100 | RefSeq:AT5G51100 | TAIR:AT5G51100 | RefSeq:AT5G51100-TAIR-G |
| EnsemblPlants:AT5G51100.1 | TAIR:AT5G51100.1 | EMBL:AY085077 | Unigene:At.212 | ProteinID:BAA97372.1 | EMBL:BT004073 |
| EMBL:BT005116 | Symbol:FSD2 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004784 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006801 |
| GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009295 | GO:GO:0009411 | GO:GO:0009507 |
| GO:GO:0009534 | GO:GO:0009536 | GO:GO:0009579 | GO:GO:0009628 | GO:GO:0009987 | GO:GO:0016491 |
| GO:GO:0019430 | GO:GO:0042644 | GO:GO:0046872 | GO:GO:0055114 | InterPro:IPR036314 | InterPro:IPR036324 |
| InterPro:Mn/Fe_SOD | InterPro:Mn/Fe_SOD_BS | InterPro:Mn/Fe_SOD_C | InterPro:Mn/Fe_SOD_N | InterPro:Mn/Fe_SOD_N_sf | RefSeq:NP_199923.1 |
| PFAM:PF00081 | PFAM:PF02777 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR01703 | ScanProsite:PS00088 | PANTHER:PTHR42769 | PANTHER:PTHR42769:SF8 |
| UniProt:Q9LU64 | InterPro:SOD_C_sf | SUPFAM:SSF46609 | SUPFAM:SSF54719 | UniParc:UPI000000C265 | EMBL:Y12641 |
| SEG:seg | : | : | : | : | : |
Description
FSD2Superoxide dismutase [Fe] 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LU64]
Coordinates
chr5:-:20773245..20775739
Molecular Weight (calculated)
34665.7 Da
IEP (calculated)
4.603
GRAVY (calculated)
-0.504
Length
305 amino acids
Sequence
(BLAST)
(BLAST)
001: MMNVAVTATP SSLLYSPLLL PSQGPNRRMQ WKRNGKRRLG TKVAVSGVIT AGFELKPPPY PLDALEPHMS RETLDYHWGK HHKTYVENLN KQILGTDLDA
101: LSLEEVVLLS YNKGNMLPAF NNAAQAWNHE FFWESIQPGG GGKPTGELLR LIERDFGSFE EFLERFKSAA ASNFGSGWTW LAYKANRLDV ANAVNPLPKE
201: EDKKLVIVKT PNAVNPLVWD YSPLLTIDTW EHAYYLDFEN RRAEYINTFM EKLVSWETVS TRLESAIARA VQREQEGTET EDEENPDDEV PEVYLDSDID
301: VSEVD
101: LSLEEVVLLS YNKGNMLPAF NNAAQAWNHE FFWESIQPGG GGKPTGELLR LIERDFGSFE EFLERFKSAA ASNFGSGWTW LAYKANRLDV ANAVNPLPKE
201: EDKKLVIVKT PNAVNPLVWD YSPLLTIDTW EHAYYLDFEN RRAEYINTFM EKLVSWETVS TRLESAIARA VQREQEGTET EDEENPDDEV PEVYLDSDID
301: VSEVD
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.