Factsheet for Bra029190.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
plastid 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra003986.1-P
Bra004407.1-P
Bra007875.1-P
Bra009670.1-P
Bra009783.1-P
Bra017974.1-P
Bra020466.1-P
Bra026503.1-P
Bra035273.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G51100.1	Bra003986.1-P	AT1G69690.1	21798944
AT5G51100.1	Bra004407.1-P	AT1G69690.1	21798944
AT5G51100.1	Bra007875.1-P	AT1G69690.1	21798944
AT5G51100.1	Bra017974.1-P	AT3G49580.1	21798944
AT5G51100.1	Bra035273.1-P	AT4G10800.1	21798944
AT5G51100.1	Bra009670.1-P	AT5G23310.1	18996978
AT5G51100.1	Bra026503.1-P	AT5G23310.1	18996978
AT5G51100.1	Bra009783.1-P	AT5G24660.1	21798944
AT5G51100.1	Bra020466.1-P	AT5G24660.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT5G51100.1	Thale cress	plastid	84.07	74.43
Bra013863.1-P	Field mustard	cytosol	50.0	63.68
KRH34597	Soybean	cytosol, nucleus	55.56	61.48
Solyc06g048420.1.1	Tomato	cytosol	35.93	60.62
KRG92190	Soybean	cytosol	54.44	59.27
Solyc06g048410.2.1	Tomato	plastid	53.7	58.23
PGSC0003DMT400013447	Potato	cytosol, extracellular, plastid	65.19	58.09
Solyc03g095180.2.1	Tomato	plastid	64.81	57.76
PGSC0003DMT400070920	Potato	extracellular, plastid	52.96	56.75
Bra035724.1-P	Field mustard	cytosol	45.19	55.2
VIT_16s0013g00260.t01	Wine grape	plastid	61.48	54.25
KRH70390	Soybean	plastid	60.74	52.23
GSMUA_Achr11P...	Banana	plastid	57.41	51.49
KRH33343	Soybean	plastid	57.78	50.32
Bra026503.1-P	Field mustard	plastid	44.07	45.25
Bra009670.1-P	Field mustard	plastid	43.7	44.87
Bra029879.1-P	Field mustard	mitochondrion	28.89	33.77
Bra034154.1-P	Field mustard	mitochondrion	28.52	33.33
Bra007239.1-P	Field mustard	cytosol	26.67	31.72
Os06t0115400-01	Rice	plastid	45.93	31.71
TraesCS4A01G434000.1	Wheat	plastid	43.33	29.92
TraesCS7D01G043000.1	Wheat	plastid	42.59	29.34
TraesCS7A01G048600.1	Wheat	mitochondrion	42.59	29.26
KXG19156	Sorghum	plastid	41.85	28.83
CDY70727	Canola	mitochondrion	29.26	28.32
HORVU7Hr1G008390.6	Barley	plastid	42.59	27.91
Zm00001d038235_P001	Maize	cytosol	1.11	20.0

Protein Annotations

Gene3D:1.10.287.990	MapMan:10.2.2.1	MapMan:15.6.1.2.2.9	Gene3D:2.40.500.20	EnsemblPlantsGene:Bra029190	EnsemblPlants:Bra029190.1
EnsemblPlants:Bra029190.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0004784	GO:GO:0005488	GO:GO:0006801
GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0019430	GO:GO:0046872
GO:GO:0055114	InterPro:IPR036314	InterPro:IPR036324	UniProt:M4EK73	InterPro:Mn/Fe_SOD	InterPro:Mn/Fe_SOD_BS
InterPro:Mn/Fe_SOD_C	InterPro:Mn/Fe_SOD_N	InterPro:Mn/Fe_SOD_N_sf	PFAM:PF00081	PFAM:PF02777	PIRSF:PIRSF000349
PRINTS:PR01703	ScanProsite:PS00088	PANTHER:PTHR42769	PANTHER:PTHR42769:SF8	InterPro:SOD_C_sf	SUPFAM:SSF46609
SUPFAM:SSF54719	UniParc:UPI0002540162	SEG:seg	:	:	:

Description

AT5G51100 (E=3e-135) FSD2 | FSD2 (FE SUPEROXIDE DISMUTASE 2); superoxide dismutase

Coordinates

chrA03:+:6771224..6772685

Molecular Weight (calculated)

30907.9 Da

IEP (calculated)

4.415

GRAVY (calculated)

-0.602

Length

270 amino acids

Sequence
(BLAST)

001: MAQRQFSRKV AVSGVVRAGF ELKPPPYPLD ALEPHMSRET LDYHWGKHHK TYVENLNKQI LGTDLDGLSL EEVVLLSYNR GNMLPVFNNA AQAWNHEFFW
101: ESIQPGGGGK PSGDLLRLIE RDFGSFDDFV ERFKAAASSN FGSGWTWLAY KANRLDVANA VNPLPKEEDK KLVIVKTPNA VNPLVWDYSP LLTIDTWEHA
201: YYLDFENRRV EYINTFMEKL VSWETVSTRL ESAMARAAQR EQEGSDTEDE EKPDEEEPEV YLDDASEEVD

Best Arabidopsis Sequence Match ( AT5G51100.1 )
(BLAST)

001: MMNVAVTATP SSLLYSPLLL PSQGPNRRMQ WKRNGKRRLG TKVAVSGVIT AGFELKPPPY PLDALEPHMS RETLDYHWGK HHKTYVENLN KQILGTDLDA
101: LSLEEVVLLS YNKGNMLPAF NNAAQAWNHE FFWESIQPGG GGKPTGELLR LIERDFGSFE EFLERFKSAA ASNFGSGWTW LAYKANRLDV ANAVNPLPKE
201: EDKKLVIVKT PNAVNPLVWD YSPLLTIDTW EHAYYLDFEN RRAEYINTFM EKLVSWETVS TRLESAIARA VQREQEGTET EDEENPDDEV PEVYLDSDID
301: VSEVD

Arabidopsis Description

FSD2Superoxide dismutase [Fe] 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LU64]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.