Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU7Hr1G011170.1 | |
| HORVU7Hr1G011320.1 | |
| HORVU7Hr1G020590.12 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G51100.1 | HORVU7Hr1G011170.1 | AT4G10800.1 | 21798944 |
| AT5G51100.1 | HORVU7Hr1G011320.1 | AT4G10800.1 | 21798944 |
| AT5G51100.1 | HORVU7Hr1G020590.12 | AT5G23310.1 | 18996978 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G434000.1 | Wheat | plastid | 79.13 | 83.38 |
| TraesCS7D01G043000.1 | Wheat | plastid | 75.97 | 79.85 |
| TraesCS7A01G048600.1 | Wheat | mitochondrion | 75.49 | 79.13 |
| Zm00001d045538_P001 | Maize | plastid | 57.28 | 61.14 |
| KXG19156 | Sorghum | plastid | 58.01 | 60.97 |
| Os06t0115400-01 | Rice | plastid | 55.83 | 58.82 |
| Bra013863.1-P | Field mustard | cytosol | 25.24 | 49.06 |
| CDY03380 | Canola | cytosol | 24.76 | 49.04 |
| CDY34342 | Canola | cytosol | 25.24 | 48.83 |
| Solyc06g048410.2.1 | Tomato | plastid | 29.13 | 48.19 |
| PGSC0003DMT400070920 | Potato | extracellular, plastid | 29.13 | 47.62 |
| CDY11055 | Canola | cytosol | 24.76 | 47.22 |
| AT4G25100.2 | Thale cress | plastid | 24.03 | 46.7 |
| CDX92676 | Canola | cytosol | 24.27 | 46.3 |
| Solyc06g048420.1.1 | Tomato | cytosol | 17.96 | 46.25 |
| KRH34597 | Soybean | cytosol, nucleus | 26.94 | 45.49 |
| GSMUA_Achr11P... | Banana | plastid | 32.52 | 44.52 |
| Solyc03g095180.2.1 | Tomato | plastid | 32.28 | 43.89 |
| PGSC0003DMT400013447 | Potato | cytosol, extracellular, plastid | 32.04 | 43.56 |
| KRG92190 | Soybean | cytosol | 25.97 | 43.15 |
| Bra029190.1-P | Field mustard | mitochondrion | 27.91 | 42.59 |
| AT5G51100.1 | Thale cress | plastid | 29.61 | 40.0 |
| VIT_16s0013g00260.t01 | Wine grape | plastid | 29.37 | 39.54 |
| KRH33343 | Soybean | plastid | 29.61 | 39.35 |
| CDY32644 | Canola | plastid | 28.64 | 39.33 |
| CDY38848 | Canola | plastid | 28.4 | 39.13 |
| KRH70390 | Soybean | plastid | 29.13 | 38.22 |
| CDY05836 | Canola | cytosol | 18.45 | 35.19 |
| Bra035724.1-P | Field mustard | cytosol | 16.26 | 30.32 |
| HORVU7Hr1G020590.12 | Barley | cytosol, plastid | 23.54 | 28.61 |
| HORVU2Hr1G117740.2 | Barley | mitochondrion, plastid | 16.75 | 27.27 |
| CDY70727 | Canola | mitochondrion | 11.41 | 16.85 |
Protein Annotations
| Gene3D:1.10.287.990 | MapMan:10.2.2.1 | Gene3D:2.40.500.20 | UniProt:A0A287VGM4 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004784 | GO:GO:0005488 | GO:GO:0006801 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0019430 | GO:GO:0046872 | GO:GO:0055114 | EnsemblPlantsGene:HORVU7Hr1G008390 | EnsemblPlants:HORVU7Hr1G008390.6 |
| InterPro:IPR036314 | InterPro:IPR036324 | InterPro:Mn/Fe_SOD | InterPro:Mn/Fe_SOD_BS | InterPro:Mn/Fe_SOD_C | InterPro:Mn/Fe_SOD_N |
| InterPro:Mn/Fe_SOD_N_sf | PFAM:PF00081 | PFAM:PF02777 | PRINTS:PR01703 | ScanProsite:PS00088 | PANTHER:PTHR42769 |
| PANTHER:PTHR42769:SF3 | InterPro:SOD_C_sf | SUPFAM:SSF46609 | SUPFAM:SSF54719 | UniParc:UPI000B465729 | SEG:seg |
Description
No Description!
Coordinates
chrchr7H:-:11037446..11040070
Molecular Weight (calculated)
45315.1 Da
IEP (calculated)
8.024
GRAVY (calculated)
-0.584
Length
412 amino acids
Sequence
(BLAST)
(BLAST)
001: PPSSHSRSAT FLPPSSRPSM AFTAPVGVGG APLSLAISAS STSSSASFLL RAGGDCPQRG RLRRLAAPRS GCARGDSRRR WDCQITRCAG EANVVTEDDT
101: ADVADDAATD QAADDAADVL DSLNPDDADS VAWIKQQPLP YPADALEPYI SKETVEQHWG VHQRGHVDRL NGMIGGSEWE RMSIGQMMLA SFNEGREPPH
201: APFFHAAQVW NHDFYWRSMK PGGGGKPPER LLKFINRDFG SYDGMIKQFM DAALTQFGSG WVWLSYKGSK LPHVDSKSPI PSDNYGRLVI SKSPNAINPL
301: VWGHSPLLAI DIWEHAYYLD YENRRAEYVS AILEKLVSWE MVESRLRKAV LRAIERDGHS SPKQRRKQLL PQAKGRDGDA STSGEARRRP RSKDQQAPSS
401: VTMVPAGEPV PN
101: ADVADDAATD QAADDAADVL DSLNPDDADS VAWIKQQPLP YPADALEPYI SKETVEQHWG VHQRGHVDRL NGMIGGSEWE RMSIGQMMLA SFNEGREPPH
201: APFFHAAQVW NHDFYWRSMK PGGGGKPPER LLKFINRDFG SYDGMIKQFM DAALTQFGSG WVWLSYKGSK LPHVDSKSPI PSDNYGRLVI SKSPNAINPL
301: VWGHSPLLAI DIWEHAYYLD YENRRAEYVS AILEKLVSWE MVESRLRKAV LRAIERDGHS SPKQRRKQLL PQAKGRDGDA STSGEARRRP RSKDQQAPSS
401: VTMVPAGEPV PN
001: MMNVAVTATP SSLLYSPLLL PSQGPNRRMQ WKRNGKRRLG TKVAVSGVIT AGFELKPPPY PLDALEPHMS RETLDYHWGK HHKTYVENLN KQILGTDLDA
101: LSLEEVVLLS YNKGNMLPAF NNAAQAWNHE FFWESIQPGG GGKPTGELLR LIERDFGSFE EFLERFKSAA ASNFGSGWTW LAYKANRLDV ANAVNPLPKE
201: EDKKLVIVKT PNAVNPLVWD YSPLLTIDTW EHAYYLDFEN RRAEYINTFM EKLVSWETVS TRLESAIARA VQREQEGTET EDEENPDDEV PEVYLDSDID
301: VSEVD
101: LSLEEVVLLS YNKGNMLPAF NNAAQAWNHE FFWESIQPGG GGKPTGELLR LIERDFGSFE EFLERFKSAA ASNFGSGWTW LAYKANRLDV ANAVNPLPKE
201: EDKKLVIVKT PNAVNPLVWD YSPLLTIDTW EHAYYLDFEN RRAEYINTFM EKLVSWETVS TRLESAIARA VQREQEGTET EDEENPDDEV PEVYLDSDID
301: VSEVD
Arabidopsis Description
FSD2Superoxide dismutase [Fe] 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LU64]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.