CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX92676	Canola	cytosol	97.69	97.69
CDY34342	Canola	cytosol	92.13	93.43
CDY03380	Canola	cytosol	89.35	92.79
AT4G25100.2	Thale cress	plastid	87.96	89.62
Solyc06g048420.1.1	Tomato	cytosol	48.61	65.62
KRG92190	Soybean	cytosol	71.76	62.5
KRH34597	Soybean	cytosol, nucleus	70.37	62.3
Solyc06g048410.2.1	Tomato	plastid	71.76	62.25
PGSC0003DMT400070920	Potato	extracellular, plastid	70.37	60.32
Solyc03g095180.2.1	Tomato	plastid	69.44	49.51
PGSC0003DMT400013447	Potato	cytosol, extracellular, plastid	69.44	49.51
VIT_16s0013g00260.t01	Wine grape	plastid	68.06	48.04
KRH70390	Soybean	plastid	67.13	46.18
KRH33343	Soybean	plastid	65.28	45.48
CDY38848	Canola	plastid	62.04	44.82
CDY32644	Canola	plastid	61.57	44.33
CDX87176	Canola	plastid	53.24	44.23
CDY16845	Canola	plastid	53.24	43.73
CDX88013	Canola	plastid	53.24	43.56
CDY45763	Canola	plastid	52.78	43.35
GSMUA_Achr11P...	Banana	plastid	56.94	40.86
CDY36283	Canola	cytosol	26.85	32.22
CDY05836	Canola	cytosol	31.48	31.48
CDY08566	Canola	mitochondrion	30.56	28.57
CDY08564	Canola	mitochondrion	30.56	28.57
CDY00976	Canola	mitochondrion	30.56	28.57
CDY27222	Canola	cytosol	29.17	27.75
KXG19156	Sorghum	plastid	48.61	26.79
Os06t0115400-01	Rice	plastid	47.69	26.34
TraesCS7D01G043000.1	Wheat	plastid	47.69	26.28
TraesCS4A01G434000.1	Wheat	plastid	46.76	25.83
TraesCS7A01G048600.1	Wheat	mitochondrion	46.76	25.7
CDX72144	Canola	endoplasmic reticulum	28.7	25.62
HORVU7Hr1G008390.6	Barley	plastid	47.22	24.76
CDY70727	Canola	mitochondrion	22.69	17.56

Protein Annotations

Gene3D:1.10.287.990	MapMan:10.2.2.1	Gene3D:2.40.500.20	GO:A0A078F9B8	UniProt:A0A078F9B8	EnsemblPlants:CDY11055
ProteinID:CDY11055	ProteinID:CDY11055.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004784	GO:GO:0005488
GO:GO:0006801	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491
GO:GO:0019430	GO:GO:0046872	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00049014001	InterPro:IPR036314	InterPro:IPR036324
InterPro:Mn/Fe_SOD	InterPro:Mn/Fe_SOD_BS	InterPro:Mn/Fe_SOD_C	InterPro:Mn/Fe_SOD_N	InterPro:Mn/Fe_SOD_N_sf	PFAM:PF00081
PFAM:PF02777	PIRSF:PIRSF000349	PRINTS:PR01703	ScanProsite:PS00088	PANTHER:PTHR42769	PANTHER:PTHR42769:SF8
MetaCyc:PWY-6854	InterPro:SOD_C_sf	SUPFAM:SSF46609	SUPFAM:SSF54719	UniParc:UPI0004EF4075	SEG:seg

Description

BnaA03g47140DSuperoxide dismutase [Source:UniProtKB/TrEMBL;Acc:A0A078F9B8]

Coordinates

chrLK032008:-:842950..844599

Molecular Weight (calculated)

24286.5 Da

IEP (calculated)

6.606

GRAVY (calculated)

-0.352

Length

216 amino acids

Sequence
(BLAST)

001: MAASSAVTAD YVLKPPPYSL DALEPHMSRQ TLEFHWGKHH RAYVDNLKKQ VLGSELEGKT LDHIILNTYN NGDLLHAFNN AAQAWNHEFF WESMKPGGGG
101: KPSGELLALL ERDFTSYEKF YDEFNAAAAT QFGAGWAWLA YADNKLKVMK TPNAVNPLVL GSFPLLTIDV WEHAYYLDFQ QNRRPDYIKT FMNNLVSWEA
201: VSSRLHAAKA ASSSSA

Best Arabidopsis Sequence Match ( AT4G25100.2 )
(BLAST)

001: MAASSAVTAN YVLKPPPFAL DALEPHMSKQ TLEFHWGKHH RAYVDNLKKQ VLGTELEGKP LEHIIHSTYN NGDLLPAFNN AAQAWNHEFF WESMKPGGGG
101: KPSGELLALL ERDFTSYEKF YEEFNAAAAT QFGAGWAWLA YSNEKLKVVK TPNAVNPLVL GSFPLLTIDV WEHAYYLDFQ NRRPDYIKTF MTNLVSWEAV
201: SARLEAAKAA SA

Arabidopsis Description

FSD1Superoxide dismutase [Fe] 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P21276]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.