Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY11055 | Canola | cytosol | 97.69 | 97.69 |
| CDY34342 | Canola | cytosol | 90.74 | 92.02 |
| CDY03380 | Canola | cytosol | 87.96 | 91.35 |
| AT4G25100.2 | Thale cress | plastid | 86.57 | 88.21 |
| Solyc06g048420.1.1 | Tomato | cytosol | 47.69 | 64.38 |
| KRG92190 | Soybean | cytosol | 71.76 | 62.5 |
| KRH34597 | Soybean | cytosol, nucleus | 70.37 | 62.3 |
| Solyc06g048410.2.1 | Tomato | plastid | 70.37 | 61.04 |
| PGSC0003DMT400070920 | Potato | extracellular, plastid | 68.98 | 59.13 |
| PGSC0003DMT400013447 | Potato | cytosol, extracellular, plastid | 68.06 | 48.51 |
| Solyc03g095180.2.1 | Tomato | plastid | 68.06 | 48.51 |
| VIT_16s0013g00260.t01 | Wine grape | plastid | 66.67 | 47.06 |
| KRH70390 | Soybean | plastid | 67.13 | 46.18 |
| KRH33343 | Soybean | plastid | 65.28 | 45.48 |
| CDY38848 | Canola | plastid | 62.5 | 45.15 |
| CDY32644 | Canola | plastid | 62.04 | 44.67 |
| CDX87176 | Canola | plastid | 53.7 | 44.62 |
| CDY16845 | Canola | plastid | 53.7 | 44.11 |
| CDX88013 | Canola | plastid | 53.7 | 43.94 |
| CDY45763 | Canola | plastid | 53.24 | 43.73 |
| GSMUA_Achr11P... | Banana | plastid | 56.94 | 40.86 |
| CDY36283 | Canola | cytosol | 26.85 | 32.22 |
| CDY05836 | Canola | cytosol | 31.02 | 31.02 |
| CDY08566 | Canola | mitochondrion | 30.56 | 28.57 |
| CDY08564 | Canola | mitochondrion | 30.56 | 28.57 |
| CDY00976 | Canola | mitochondrion | 30.56 | 28.57 |
| CDY27222 | Canola | cytosol | 29.17 | 27.75 |
| Os06t0115400-01 | Rice | plastid | 48.15 | 26.6 |
| KXG19156 | Sorghum | plastid | 48.15 | 26.53 |
| TraesCS7D01G043000.1 | Wheat | plastid | 46.76 | 25.77 |
| CDX72144 | Canola | endoplasmic reticulum | 28.7 | 25.62 |
| TraesCS4A01G434000.1 | Wheat | plastid | 45.83 | 25.32 |
| TraesCS7A01G048600.1 | Wheat | mitochondrion | 45.83 | 25.19 |
| HORVU7Hr1G008390.6 | Barley | plastid | 46.3 | 24.27 |
| CDY70727 | Canola | mitochondrion | 23.61 | 18.28 |
Protein Annotations
| Gene3D:1.10.287.990 | MapMan:10.2.2.1 | Gene3D:2.40.500.20 | GO:A0A078DTS7 | EnsemblPlants:CDX92676 | ProteinID:CDX92676 |
| ProteinID:CDX92676.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004784 | GO:GO:0005488 | GO:GO:0006801 |
| GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0046872 | GO:GO:0055114 |
| EnsemblPlantsGene:GSBRNA2T00154487001 | InterPro:IPR036314 | InterPro:IPR036324 | InterPro:Mn/Fe_SOD | InterPro:Mn/Fe_SOD_BS | InterPro:Mn/Fe_SOD_C |
| InterPro:Mn/Fe_SOD_N | InterPro:Mn/Fe_SOD_N_sf | PFAM:PF00081 | PFAM:PF02777 | PIRSF:PIRSF000349 | PRINTS:PR01703 |
| ScanProsite:PS00088 | PANTHER:PTHR42769 | PANTHER:PTHR42769:SF8 | MetaCyc:PWY-6854 | InterPro:SOD_C_sf | SUPFAM:SSF46609 |
| SUPFAM:SSF54719 | UniParc:UPI0004EDC05D | SEG:seg | : | : | : |
Description
BnaC07g39340D
Coordinates
chrLK031873:-:288733..290775
Molecular Weight (calculated)
24299.6 Da
IEP (calculated)
6.635
GRAVY (calculated)
-0.356
Length
216 amino acids
Sequence
(BLAST)
(BLAST)
001: MAASSAVTAD YVLKPPPYSL DALEPFMSRQ TLEFHWGKHH RAYVENLKKQ VLGSDLEGKT LDHIILNTYN NGDLLPAFNN AAQAWNHEFF WESMKPGGGG
101: KPSGELLARL ERDFTSYEKF YDEFNAAAAT QFGAGWAWLA YADNKLKVMK TPNAVNPLVL GSFPLLTIDV WEHAYYLDFQ QNRRPDYIKT FMNNLVSWEA
201: VSSRLHAAKA ASSSSA
101: KPSGELLARL ERDFTSYEKF YDEFNAAAAT QFGAGWAWLA YADNKLKVMK TPNAVNPLVL GSFPLLTIDV WEHAYYLDFQ QNRRPDYIKT FMNNLVSWEA
201: VSSRLHAAKA ASSSSA
001: MAASSAVTAN YVLKPPPFAL DALEPHMSKQ TLEFHWGKHH RAYVDNLKKQ VLGTELEGKP LEHIIHSTYN NGDLLPAFNN AAQAWNHEFF WESMKPGGGG
101: KPSGELLALL ERDFTSYEKF YEEFNAAAAT QFGAGWAWLA YSNEKLKVVK TPNAVNPLVL GSFPLLTIDV WEHAYYLDFQ NRRPDYIKTF MTNLVSWEAV
201: SARLEAAKAA SA
101: KPSGELLALL ERDFTSYEKF YEEFNAAAAT QFGAGWAWLA YSNEKLKVVK TPNAVNPLVL GSFPLLTIDV WEHAYYLDFQ NRRPDYIKTF MTNLVSWEAV
201: SARLEAAKAA SA
Arabidopsis Description
FSD1Superoxide dismutase [Fe] 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P21276]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.