CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra013863.1-P	Field mustard	cytosol	99.53	100.0
CDY03380	Canola	cytosol	97.18	99.52
AT4G25100.2	Thale cress	plastid	92.96	93.4
CDY11055	Canola	cytosol	93.43	92.13
CDX92676	Canola	cytosol	92.02	90.74
Solyc06g048420.1.1	Tomato	cytosol	48.83	65.0
KRH34597	Soybean	cytosol, nucleus	72.77	63.52
KRG92190	Soybean	cytosol	73.71	63.31
Solyc06g048410.2.1	Tomato	plastid	72.77	62.25
PGSC0003DMT400070920	Potato	extracellular, plastid	71.36	60.32
Solyc03g095180.2.1	Tomato	plastid	71.83	50.49
PGSC0003DMT400013447	Potato	cytosol, extracellular, plastid	71.83	50.49
VIT_16s0013g00260.t01	Wine grape	plastid	69.01	48.04
KRH70390	Soybean	plastid	69.95	47.45
KRH33343	Soybean	plastid	67.61	46.45
CDY38848	Canola	plastid	64.32	45.82
CDX87176	Canola	plastid	55.4	45.38
CDY32644	Canola	plastid	63.85	45.33
CDY16845	Canola	plastid	55.4	44.87
CDY45763	Canola	plastid	55.4	44.87
CDX88013	Canola	plastid	55.4	44.7
GSMUA_Achr11P...	Banana	plastid	55.87	39.53
CDY36283	Canola	cytosol	27.7	32.78
CDY05836	Canola	cytosol	32.86	32.41
CDY08564	Canola	mitochondrion	31.46	29.0
CDY00976	Canola	mitochondrion	31.46	29.0
CDY08566	Canola	mitochondrion	31.46	29.0
CDY27222	Canola	cytosol	30.05	28.19
KXG19156	Sorghum	plastid	50.7	27.55
Os06t0115400-01	Rice	plastid	49.77	27.11
TraesCS7D01G043000.1	Wheat	plastid	49.3	26.79
TraesCS4A01G434000.1	Wheat	plastid	48.36	26.34
TraesCS7A01G048600.1	Wheat	mitochondrion	48.36	26.21
CDX72144	Canola	endoplasmic reticulum	29.11	25.62
HORVU7Hr1G008390.6	Barley	plastid	48.83	25.24
CDY70727	Canola	mitochondrion	23.47	17.92

Protein Annotations

Gene3D:1.10.287.990	MapMan:10.2.2.1	Gene3D:2.40.500.20	GO:A0A078H9K7	UniProt:A0A078H9K7	EnsemblPlants:CDY34342
ProteinID:CDY34342	ProteinID:CDY34342.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004784	GO:GO:0005488
GO:GO:0006801	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491
GO:GO:0019430	GO:GO:0046872	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00056381001	InterPro:IPR036314	InterPro:IPR036324
InterPro:Mn/Fe_SOD	InterPro:Mn/Fe_SOD_BS	InterPro:Mn/Fe_SOD_C	InterPro:Mn/Fe_SOD_N	InterPro:Mn/Fe_SOD_N_sf	PFAM:PF00081
PFAM:PF02777	PIRSF:PIRSF000349	PRINTS:PR01703	ScanProsite:PS00088	PANTHER:PTHR42769	PANTHER:PTHR42769:SF8
MetaCyc:PWY-6854	InterPro:SOD_C_sf	SUPFAM:SSF46609	SUPFAM:SSF54719	UniParc:UPI0004EEF641	SEG:seg

Description

BnaA01g14450DSuperoxide dismutase [Source:UniProtKB/TrEMBL;Acc:A0A078H9K7]

Coordinates

chrLK032332:-:377976..381541

Molecular Weight (calculated)

23977.2 Da

IEP (calculated)

6.398

GRAVY (calculated)

-0.385

Length

213 amino acids

Sequence
(BLAST)

001: MAASAAVTAN YVLKPPPYPL DALEPHMSKQ TLEFHWGKHH RAYVDNLKKQ VLGSELEGKP LEHIIQNTYN NGDLLPPFNN AAQAWNHEFF WESMKPGGGG
101: KPSGELLALL ERDFTSYEKF YDEFNAAAAT QFGAGWAWLA YADNKLKVVK TPNAVNPLVL GSFPLLTIDV WEHAYYLDFQ QNRRPDYIKT FMNNLVSWEA
201: VSSRLEAAKA ASS

Best Arabidopsis Sequence Match ( AT4G25100.2 )
(BLAST)

001: MAASSAVTAN YVLKPPPFAL DALEPHMSKQ TLEFHWGKHH RAYVDNLKKQ VLGTELEGKP LEHIIHSTYN NGDLLPAFNN AAQAWNHEFF WESMKPGGGG
101: KPSGELLALL ERDFTSYEKF YEEFNAAAAT QFGAGWAWLA YSNEKLKVVK TPNAVNPLVL GSFPLLTIDV WEHAYYLDFQ NRRPDYIKTF MTNLVSWEAV
201: SARLEAAKAA SA

Arabidopsis Description

FSD1Superoxide dismutase [Fe] 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P21276]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.