Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra035724.1-P | Field mustard | cytosol | 90.74 | 88.69 |
| AT5G51100.1 | Thale cress | plastid | 63.89 | 45.25 |
| CDY38848 | Canola | plastid | 62.5 | 45.15 |
| CDY32644 | Canola | plastid | 61.57 | 44.33 |
| Solyc06g048420.1.1 | Tomato | cytosol | 26.85 | 36.25 |
| PGSC0003DMT400013447 | Potato | cytosol, extracellular, plastid | 49.07 | 34.98 |
| Solyc03g095180.2.1 | Tomato | plastid | 48.61 | 34.65 |
| CDY34342 | Canola | cytosol | 32.41 | 32.86 |
| CDY03380 | Canola | cytosol | 31.48 | 32.69 |
| KRH34597 | Soybean | cytosol, nucleus | 36.11 | 31.97 |
| CDY11055 | Canola | cytosol | 31.48 | 31.48 |
| KRG92190 | Soybean | cytosol | 36.11 | 31.45 |
| VIT_16s0013g00260.t01 | Wine grape | plastid | 43.98 | 31.05 |
| CDX92676 | Canola | cytosol | 31.02 | 31.02 |
| Solyc06g048410.2.1 | Tomato | plastid | 35.65 | 30.92 |
| GSMUA_Achr11P... | Banana | plastid | 43.06 | 30.9 |
| PGSC0003DMT400070920 | Potato | extracellular, plastid | 35.19 | 30.16 |
| KRH33343 | Soybean | plastid | 41.2 | 28.71 |
| KRH70390 | Soybean | plastid | 41.2 | 28.34 |
| CDY36283 | Canola | cytosol | 18.98 | 22.78 |
| CDY16845 | Canola | plastid | 26.39 | 21.67 |
| CDY00976 | Canola | mitochondrion | 23.15 | 21.64 |
| CDY08566 | Canola | mitochondrion | 23.15 | 21.64 |
| CDY08564 | Canola | mitochondrion | 23.15 | 21.64 |
| CDX88013 | Canola | plastid | 26.39 | 21.59 |
| CDX87176 | Canola | plastid | 25.93 | 21.54 |
| CDY45763 | Canola | plastid | 25.93 | 21.29 |
| Os06t0115400-01 | Rice | plastid | 36.57 | 20.2 |
| Zm00001d038235_P001 | Maize | cytosol | 1.39 | 20.0 |
| TraesCS7A01G048600.1 | Wheat | mitochondrion | 36.11 | 19.85 |
| CDY27222 | Canola | cytosol | 20.83 | 19.82 |
| TraesCS4A01G434000.1 | Wheat | plastid | 35.19 | 19.44 |
| TraesCS7D01G043000.1 | Wheat | plastid | 35.19 | 19.39 |
| KXG19156 | Sorghum | plastid | 33.8 | 18.62 |
| CDX72144 | Canola | endoplasmic reticulum | 20.83 | 18.59 |
| HORVU7Hr1G008390.6 | Barley | plastid | 35.19 | 18.45 |
| CDY70727 | Canola | mitochondrion | 3.7 | 2.87 |
Protein Annotations
| Gene3D:2.40.500.20 | MapMan:35.1 | GO:A0A078EXA7 | EnsemblPlants:CDY05836 | ProteinID:CDY05836 | ProteinID:CDY05836.1 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004784 | GO:GO:0005488 | GO:GO:0006801 | GO:GO:0006950 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0046872 | GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00120968001 |
| InterPro:IPR036314 | InterPro:Mn/Fe_SOD_BS | InterPro:Mn/Fe_SOD_C | PFAM:PF02777 | ScanProsite:PS00088 | PANTHER:PTHR42769 |
| PANTHER:PTHR42769:SF3 | MetaCyc:PWY-6854 | InterPro:SOD_C_sf | SUPFAM:SSF54719 | UniParc:UPI0004EE2D58 | SEG:seg |
Description
BnaA10g05840D
Coordinates
chrLK031965:-:608280..610770
Molecular Weight (calculated)
24919.0 Da
IEP (calculated)
4.245
GRAVY (calculated)
-0.521
Length
216 amino acids
Sequence
(BLAST)
(BLAST)
001: MNFRSPSSHT SDLLLSILQI CSSDITDELS EEDDALRKRG RRQVKKEEFG FEIALGAMEF SPFINQIFRW EKKIERFKAA AASNFGSGWT WLAYKANRLD
101: VANAINPLPT EEDKKLVIVK TPNAVNPLVW DYSPLLAIDT WEHAYYLDFE NRRAEYINIF MEKLVSWETV STRLESAMAR AAQREQEGTY TEDEENSEDE
201: EPEVYLDSDV DVSVVD
101: VANAINPLPT EEDKKLVIVK TPNAVNPLVW DYSPLLAIDT WEHAYYLDFE NRRAEYINIF MEKLVSWETV STRLESAMAR AAQREQEGTY TEDEENSEDE
201: EPEVYLDSDV DVSVVD
001: MSRETLDYHW GKHHKTYVEN LNKQILGTDL DALSLEEVVL LSYNKGNMLP AFNNAAQAWN HEFFWESIQP GGGGKPTGEL LRLIERDFGS FEEFLERFKS
101: AAASNFGSGW TWLAYKANRL DVANAVNPLP KEEDKKLVIV KTPNAVNPLV WDYSPLLTID TWEHAYYLDF ENRRAEYINT FMEKLVSWET VSTRLESAIA
201: RAVQREQEGT ETEDEENPDD EVPEVYLDSD IDVSEVD
101: AAASNFGSGW TWLAYKANRL DVANAVNPLP KEEDKKLVIV KTPNAVNPLV WDYSPLLTID TWEHAYYLDF ENRRAEYINT FMEKLVSWET VSTRLESAIA
201: RAVQREQEGT ETEDEENPDD EVPEVYLDSD IDVSEVD
Arabidopsis Description
FSD2Superoxide dismutase [Fe] 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LU64]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.