CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

extracellular 2
golgi 2
plasma membrane 2
endoplasmic reticulum 2
vacuole 2
plastid 6
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
EER89111
KXG19271

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G51100.1	EER89111	AT4G10800.1	21798944
AT5G51100.1	KXG19271	AT5G23310.1	18996978

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d045538_P001	Maize	plastid	77.81	79.02
TraesCS4A01G434000.1	Wheat	plastid	60.2	60.36
Os06t0115400-01	Rice	plastid	59.95	60.1
TraesCS7D01G043000.1	Wheat	plastid	59.69	59.69
TraesCS7A01G048600.1	Wheat	mitochondrion	59.69	59.54
HORVU7Hr1G008390.6	Barley	plastid	60.97	58.01
CDY03380	Canola	cytosol	27.04	50.96
Bra013863.1-P	Field mustard	cytosol	27.55	50.94
CDY34342	Canola	cytosol	27.55	50.7
CDY11055	Canola	cytosol	26.79	48.61
AT4G25100.2	Thale cress	plastid	26.28	48.58
CDX92676	Canola	cytosol	26.53	48.15
Solyc06g048420.1.1	Tomato	cytosol	18.88	46.25
KRH34597	Soybean	cytosol, nucleus	28.32	45.49
Solyc06g048410.2.1	Tomato	plastid	28.83	45.38
PGSC0003DMT400070920	Potato	extracellular, plastid	28.83	44.84
Solyc03g095180.2.1	Tomato	plastid	33.67	43.56
KRG92190	Soybean	cytosol	27.55	43.55
PGSC0003DMT400013447	Potato	cytosol, extracellular, plastid	33.42	43.23
GSMUA_Achr11P...	Banana	plastid	33.16	43.19
Bra029190.1-P	Field mustard	mitochondrion	28.83	41.85
VIT_16s0013g00260.t01	Wine grape	plastid	31.38	40.2
AT5G51100.1	Thale cress	plastid	30.61	39.34
CDY32644	Canola	plastid	29.85	39.0
CDY38848	Canola	plastid	29.59	38.8
KRH70390	Soybean	plastid	30.36	37.9
KRH33343	Soybean	plastid	29.85	37.74
KXG19271	Sorghum	plastid	23.72	35.63
CDY05836	Canola	cytosol	18.62	33.8
Bra035724.1-P	Field mustard	cytosol	16.33	28.96
EES17972	Sorghum	mitochondrion	16.33	27.47
CDY70727	Canola	mitochondrion	12.5	17.56

Protein Annotations

Gene3D:1.10.287.990	MapMan:10.2.2.1	Gene3D:2.40.500.20	UniProt:A0A194YHS4	GO:GO:0003674	GO:GO:0003824
GO:GO:0004784	GO:GO:0005488	GO:GO:0006801	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0019430	GO:GO:0046872	GO:GO:0055114	InterPro:IPR036314	InterPro:IPR036324
EnsemblPlants:KXG19156	ProteinID:KXG19156	ProteinID:KXG19156.1	InterPro:Mn/Fe_SOD	InterPro:Mn/Fe_SOD_BS	InterPro:Mn/Fe_SOD_C
InterPro:Mn/Fe_SOD_N	InterPro:Mn/Fe_SOD_N_sf	PFAM:PF00081	PFAM:PF02777	PRINTS:PR01703	ScanProsite:PS00088
PANTHER:PTHR42769	PANTHER:PTHR42769:SF3	MetaCyc:PWY-6854	InterPro:SOD_C_sf	EnsemblPlantsGene:SORBI_3010G012900	SUPFAM:SSF46609
SUPFAM:SSF54719	SignalP:SignalP-noTM	UniParc:UPI0003C68954	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr10:-:1084569..1087296

Molecular Weight (calculated)

43561.1 Da

IEP (calculated)

4.928

GRAVY (calculated)

-0.517

Length

392 amino acids

Sequence
(BLAST)

001: MASTALVAVA VGGGLCPGLV ASCSVASCSL RAGGGDSPRL GRRLVLLQRG GGAEGERKRI RNCPIFRCAN EVDVVTEDDN VDGDATDDEE DLEAAADDAI
101: DADVDTEDEL DSSLPEDVEW IKQQPLPYPL DALEPYISKE TVGQHWGVHQ QIHVDRLNGM IGGSEWEGMS LGQMMLASFN EGREQPHPPF FHAAQVWNHD
201: FYWRSMKPGG GGKPPERLLK FINRDFGSYE GMIRQFMDAA LTQFGSGWVW LSYKGSGLPY VKSRSPIASD NYGRLVISKT PNAINPLVWG HSPLLGIDVW
301: EHAYYLDYED RRADYVSAIL ENLVSWEIVE SRLTKAVVRA VERDEDLRRR IQRKQHLSQA NGQSRARPRT RQGRPTGWQG DQEVARSSPV EA

Best Arabidopsis Sequence Match ( AT5G51100.1 )
(BLAST)

001: MMNVAVTATP SSLLYSPLLL PSQGPNRRMQ WKRNGKRRLG TKVAVSGVIT AGFELKPPPY PLDALEPHMS RETLDYHWGK HHKTYVENLN KQILGTDLDA
101: LSLEEVVLLS YNKGNMLPAF NNAAQAWNHE FFWESIQPGG GGKPTGELLR LIERDFGSFE EFLERFKSAA ASNFGSGWTW LAYKANRLDV ANAVNPLPKE
201: EDKKLVIVKT PNAVNPLVWD YSPLLTIDTW EHAYYLDFEN RRAEYINTFM EKLVSWETVS TRLESAIARA VQREQEGTET EDEENPDDEV PEVYLDSDID
301: VSEVD

Arabidopsis Description

FSD2Superoxide dismutase [Fe] 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LU64]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.