Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY12093 | Canola | cytosol | 94.3 | 96.55 |
| Bra010735.1-P | Field mustard | cytosol | 95.6 | 96.34 |
| CDX90286 | Canola | cytosol, nucleus, plastid | 94.04 | 96.29 |
| CDY22415 | Canola | cytosol | 91.71 | 94.4 |
| Bra033573.1-P | Field mustard | cytosol | 93.01 | 94.23 |
| CDX72742 | Canola | extracellular | 90.67 | 93.83 |
| VIT_04s0023g03620.t01 | Wine grape | cytosol | 68.39 | 65.35 |
| KRH76642 | Soybean | cytosol | 68.13 | 64.94 |
| KRH28809 | Soybean | nucleus | 68.13 | 64.94 |
| KRH69766 | Soybean | cytosol | 67.62 | 64.44 |
| PGSC0003DMT400009215 | Potato | cytosol | 67.1 | 64.27 |
| Solyc02g083710.2.1 | Tomato | endoplasmic reticulum, extracellular | 66.84 | 64.02 |
| Os03t0243300-01 | Rice | plasma membrane | 66.58 | 63.93 |
| EER92569 | Sorghum | cytosol | 66.06 | 63.59 |
| KRH08049 | Soybean | cytosol | 65.54 | 63.57 |
| TraesCS4D01G227900.2 | Wheat | cytosol | 65.54 | 63.09 |
| TraesCS4B01G227200.2 | Wheat | cytosol | 65.54 | 62.62 |
| TraesCS4A01G071300.2 | Wheat | cytosol | 65.03 | 62.59 |
| GSMUA_Achr4P25580_001 | Banana | cytosol | 64.51 | 62.25 |
| GSMUA_Achr2P11290_001 | Banana | cytosol, nucleus, plastid | 61.4 | 60.61 |
| GSMUA_Achr11P... | Banana | golgi, vacuole | 64.51 | 53.9 |
| Zm00001d028396_P001 | Maize | nucleus | 62.69 | 53.54 |
| Zm00001d047941_P001 | Maize | cytosol | 60.88 | 52.22 |
| HORVU4Hr1G063820.1 | Barley | cytosol, mitochondrion, nucleus | 64.77 | 50.81 |
| PGSC0003DMT400058116 | Potato | cytosol | 53.37 | 48.36 |
| Solyc03g033430.1.1 | Tomato | cytosol | 21.24 | 48.24 |
| Zm00001d024336_P001 | Maize | mitochondrion | 9.59 | 38.95 |
| VIT_04s0008g00060.t01 | Wine grape | nucleus | 9.33 | 34.95 |
| Zm00001d040834_P001 | Maize | plastid | 13.99 | 27.14 |
Protein Annotations
| MapMan:19.2.6.2.2.9 | Gene3D:3.40.50.410 | EntrezGene:830019 | UniProt:A0A178V4I4 | ProteinID:AEE86956.1 | EMBL:AF360319 |
| EMBL:AL035656 | ArrayExpress:AT4G38630 | EnsemblPlantsGene:AT4G38630 | RefSeq:AT4G38630 | TAIR:AT4G38630 | RefSeq:AT4G38630-TAIR-G |
| EnsemblPlants:AT4G38630.1 | TAIR:AT4G38630.1 | EMBL:AY088449 | EMBL:AY113889 | ProteinID:CAB37519.1 | ProteinID:CAB80527.1 |
| ncoils:Coil | GO:GO:0000003 | GO:GO:0000502 | GO:GO:0001653 | GO:GO:0003674 | GO:GO:0004871 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006950 | GO:GO:0006974 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009408 | GO:GO:0009555 |
| GO:GO:0009628 | GO:GO:0009651 | GO:GO:0009653 | GO:GO:0009719 | GO:GO:0009733 | GO:GO:0009735 |
| GO:GO:0009737 | GO:GO:0009744 | GO:GO:0009791 | GO:GO:0009908 | GO:GO:0009987 | GO:GO:0010029 |
| GO:GO:0010150 | GO:GO:0016020 | GO:GO:0016043 | GO:GO:0016049 | GO:GO:0019538 | GO:GO:0030154 |
| GO:GO:0030163 | GO:GO:0031593 | GO:GO:0038023 | GO:GO:0040007 | GO:GO:0043161 | GO:GO:0043248 |
| GO:GO:0048366 | GO:GO:0048455 | GO:GO:0048528 | GO:GO:0048767 | GO:GO:0051788 | InterPro:IPR002035 |
| InterPro:IPR003903 | InterPro:IPR036465 | RefSeq:NP_195575.1 | ProteinID:OAP00704.1 | UniProt:P55034 | PFAM:PF02809 |
| PFAM:PF13519 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001170 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PFscan:PS50234 |
| PFscan:PS50330 | PANTHER:PTHR10223 | PANTHER:PTHR10223:SF5 | Symbol:RPN10 | SMART:SM00327 | SMART:SM00726 |
| SUPFAM:SSF53300 | EMBL:U33269 | InterPro:UIM_dom | UniParc:UPI00000016E4 | InterPro:VWF_A | SEG:seg |
| InterPro:vWFA_dom_sf | : | : | : | : | : |
Description
RPN10RPN10 [Source:UniProtKB/TrEMBL;Acc:A0A178V4I4]
Coordinates
chr4:-:18056988..18059598
Molecular Weight (calculated)
40759.6 Da
IEP (calculated)
4.216
GRAVY (calculated)
-0.390
Length
386 amino acids
Sequence
(BLAST)
(BLAST)
001: MVLEATMICI DNSEWMRNGD YSPSRLQAQT EAVNLLCGAK TQSNPENTVG ILTMAGKGVR VLTTPTSDLG KILACMHGLD VGGEINLTAA IQIAQLALKH
101: RQNKNQRQRI IVFAGSPIKY EKKALEIVGK RLKKNSVSLD IVNFGEDDDE EKPQKLEALL TAVNNNDGSH IVHVPSGANA LSDVLLSTPV FTGDEGASGY
201: VSAAAAAAAA GGDFDFGVDP NIDPELALAL RVSMEEERAR QEAAAKKAAD EAGQKDKDGD TASASQETVA RTTDKNAEPM DEDSALLDQA IAMSVGDVNM
301: SEAADEDQDL ALALQMSMSG EESSEATGAG NNLLGNQAFI SSVLSSLPGV DPNDPAVKEL LASLPDESKR TEEEESSSKK GEDEKK
101: RQNKNQRQRI IVFAGSPIKY EKKALEIVGK RLKKNSVSLD IVNFGEDDDE EKPQKLEALL TAVNNNDGSH IVHVPSGANA LSDVLLSTPV FTGDEGASGY
201: VSAAAAAAAA GGDFDFGVDP NIDPELALAL RVSMEEERAR QEAAAKKAAD EAGQKDKDGD TASASQETVA RTTDKNAEPM DEDSALLDQA IAMSVGDVNM
301: SEAADEDQDL ALALQMSMSG EESSEATGAG NNLLGNQAFI SSVLSSLPGV DPNDPAVKEL LASLPDESKR TEEEESSSKK GEDEKK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.