Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 5
- plastid 1
- cytosol 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d040834_P001 | Maize | plastid | 67.37 | 32.16 |
| VIT_04s0008g00060.t01 | Wine grape | nucleus | 32.63 | 30.1 |
| EER92569 | Sorghum | cytosol | 74.74 | 17.71 |
| Zm00001d028396_P001 | Maize | nucleus | 74.74 | 15.71 |
| TraesCS4B01G227200.2 | Wheat | cytosol | 61.05 | 14.36 |
| TraesCS4D01G227900.2 | Wheat | cytosol | 60.0 | 14.21 |
| TraesCS4A01G071300.2 | Wheat | cytosol | 60.0 | 14.21 |
| Os03t0243300-01 | Rice | plasma membrane | 60.0 | 14.18 |
| Zm00001d047941_P001 | Maize | cytosol | 65.26 | 13.78 |
| GSMUA_Achr4P25580_001 | Banana | cytosol | 52.63 | 12.5 |
| Solyc02g083710.2.1 | Tomato | endoplasmic reticulum, extracellular | 52.63 | 12.41 |
| PGSC0003DMT400009215 | Potato | cytosol | 52.63 | 12.41 |
| KRH28809 | Soybean | nucleus | 52.63 | 12.35 |
| KRH76642 | Soybean | cytosol | 51.58 | 12.1 |
| KRH69766 | Soybean | cytosol | 50.53 | 11.85 |
| KRH08049 | Soybean | cytosol | 49.47 | 11.81 |
| HORVU4Hr1G063820.1 | Barley | cytosol, mitochondrion, nucleus | 61.05 | 11.79 |
| GSMUA_Achr2P11290_001 | Banana | cytosol, nucleus, plastid | 48.42 | 11.76 |
| GSMUA_Achr11P... | Banana | golgi, vacuole | 51.58 | 10.61 |
| CDX72742 | Canola | extracellular | 38.95 | 9.92 |
| Bra033573.1-P | Field mustard | cytosol | 38.95 | 9.71 |
| Bra010735.1-P | Field mustard | cytosol | 38.95 | 9.66 |
| CDY22415 | Canola | cytosol | 37.89 | 9.6 |
| AT4G38630.1 | Thale cress | cytosol | 38.95 | 9.59 |
| CDY12093 | Canola | cytosol | 37.89 | 9.55 |
| CDX90286 | Canola | cytosol, nucleus, plastid | 37.89 | 9.55 |
| PGSC0003DMT400058116 | Potato | cytosol | 32.63 | 7.28 |
| Zm00001d030290_P001 | Maize | cytosol | 10.53 | 2.89 |
| Solyc03g033430.1.1 | Tomato | cytosol | 3.16 | 1.76 |
Protein Annotations
| EnsemblPlants:Zm00001d024336_P001 | EnsemblPlants:Zm00001d024336_T001 | EnsemblPlantsGene:Zm00001d024336 | GO:GO:0000502 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | InterPro:IPR003903 | InterPro:UIM_dom | PANTHER:PTHR10223 | PANTHER:PTHR10223:SF5 | PFscan:PS50330 |
| ProteinID:AQK41042.1 | UniParc:UPI000843BF67 | UniProt:A0A1D6IYU3 | MapMan:35.1 | : | : |
Description
26S proteasome non-ATPase regulatory subunit 4 homolog
Coordinates
chr10:-:65375833..65376593
Molecular Weight (calculated)
10001.1 Da
IEP (calculated)
4.058
GRAVY (calculated)
0.172
Length
95 amino acids
Sequence
(BLAST)
(BLAST)
1: MLQRLMTFQR ARAMSMEGGA LGSTAVTDSA MAKAGAVDPD LALALQMSVQ DANMSSDTDM SKVFEDITFV SSILNSLPGV DPNDPSVKGL CIVMQ
001: MVLEATMICI DNSEWMRNGD YSPSRLQAQT EAVNLLCGAK TQSNPENTVG ILTMAGKGVR VLTTPTSDLG KILACMHGLD VGGEINLTAA IQIAQLALKH
101: RQNKNQRQRI IVFAGSPIKY EKKALEIVGK RLKKNSVSLD IVNFGEDDDE EKPQKLEALL TAVNNNDGSH IVHVPSGANA LSDVLLSTPV FTGDEGASGY
201: VSAAAAAAAA GGDFDFGVDP NIDPELALAL RVSMEEERAR QEAAAKKAAD EAGQKDKDGD TASASQETVA RTTDKNAEPM DEDSALLDQA IAMSVGDVNM
301: SEAADEDQDL ALALQMSMSG EESSEATGAG NNLLGNQAFI SSVLSSLPGV DPNDPAVKEL LASLPDESKR TEEEESSSKK GEDEKK
101: RQNKNQRQRI IVFAGSPIKY EKKALEIVGK RLKKNSVSLD IVNFGEDDDE EKPQKLEALL TAVNNNDGSH IVHVPSGANA LSDVLLSTPV FTGDEGASGY
201: VSAAAAAAAA GGDFDFGVDP NIDPELALAL RVSMEEERAR QEAAAKKAAD EAGQKDKDGD TASASQETVA RTTDKNAEPM DEDSALLDQA IAMSVGDVNM
301: SEAADEDQDL ALALQMSMSG EESSEATGAG NNLLGNQAFI SSVLSSLPGV DPNDPAVKEL LASLPDESKR TEEEESSSKK GEDEKK
Arabidopsis Description
RPN10RPN10 [Source:UniProtKB/TrEMBL;Acc:A0A178V4I4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.