Factsheet for Bra020991.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra024829.1-P	Field mustard	cytosol	48.63	48.03
Bra013348.1-P	Field mustard	cytosol	43.39	46.77
Bra001803.1-P	Field mustard	cytosol	42.39	45.58
Bra021512.1-P	Field mustard	plastid	43.39	44.39
Bra022464.1-P	Field mustard	cytosol	40.65	42.78
Bra001800.1-P	Field mustard	cytosol	42.89	42.57
Bra002578.1-P	Field mustard	cytosol	39.4	42.47
Bra024830.1-P	Field mustard	nucleus, plastid	46.63	42.31
Bra033383.1-P	Field mustard	cytosol	40.4	41.97
Bra001764.1-P	Field mustard	cytosol	41.65	41.96
Bra017069.1-P	Field mustard	cytosol	39.65	41.3
Bra035173.1-P	Field mustard	cytosol, extracellular, mitochondrion, nucleus	36.16	40.62
Bra017247.1-P	Field mustard	mitochondrion	33.92	39.77
Bra021825.1-P	Field mustard	cytosol	29.43	39.6
Bra017242.1-P	Field mustard	cytosol	38.15	39.43
Bra041044.1-P	Field mustard	cytosol	31.17	38.23
Bra029507.1-P	Field mustard	cytosol	37.66	38.13
Bra021823.1-P	Field mustard	cytosol	34.16	37.64
Bra041045.1-P	Field mustard	nucleus	34.91	36.94
Bra017228.1-P	Field mustard	cytosol	22.69	35.69
Bra018376.1-P	Field mustard	cytosol	20.7	35.62
Bra004262.1-P	Field mustard	cytosol, nucleus, peroxisome	34.66	35.28

Protein Annotations

EnsemblPlants:Bra020991.1	EnsemblPlants:Bra020991.1-P	EnsemblPlantsGene:Bra020991	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:F-box-assoc_dom_typ1	InterPro:F-box-assoc_interact_dom	InterPro:F-box-like_dom_sf	PANTHER:PTHR44355	PFAM:PF07734	SEG:seg
SUPFAM:SSF81383	TIGRFAMs:TIGR01640	UniParc:UPI0002545660	UniProt:M4DWU5	MapMan:35.1	:

Description

AT3G49510 (E=1e-087) | F-box family protein

Coordinates

chrA08:-:10714486..10715691

Molecular Weight (calculated)

45662.0 Da

IEP (calculated)

8.214

GRAVY (calculated)

-0.231

Length

401 amino acids

Sequence
(BLAST)

001: MTMMCDLPHD LLGEKILAKV PITSLKAIRS TCKLWNVLSK DFIVGKTTSR QHEFLGFMTI RSKVCSLRFG LRGIHNQDAL VDPSTKQVRL LDQVEITKIF
101: HCDGLVLCVT KENSKLLVWN PYLGQTKWIE TRKQLHKSDM YALGCNNNSK VPNYKILRLH CCYDYYNHGR LSGSEIYNSM SESWSVLDLI PDCEIDYYQR
201: GVTLKGDTYF FARGTAPHEV GNDAGIIGLG VFMLCFDYTK ERFGPHLTLP FTITDNRHEA VVLSCVREEQ LAVLYEKSQS NILDFWVTNK IESNVVSWSK
301: FLKVDLTIKQ PRHPLVHRNH GSFFIDEEKK VAVVFDIGLN DSSRHYATTA FIVGEEGYFT SVNIGKEPTR SGSSHPPLVS SSYLPSLLQI NQPHQRKETA
401: V

Best Arabidopsis Sequence Match ( AT3G13680.1 )
(BLAST)

001: MTTMGDLPGD LVEEILSRVP LTSLRAIRST CQKWNSLSKS QICGRKATAA ENKFLGFMMK DSRVCSMKFD LQGIRNDDGE LVEPSIKQVS KLDQIEVSQV
101: FHCDGLVLCI IKDNTGLLVW NPYLGQTRWI HPRNNYQIED RYALGYDNNR NHKILRIFDL YPSSNRVFGY EVYDFSSNSW KVLDVIPEWD IQSHFRGASL
201: KGNAYFPAQK KETVGGIKTI NIEDVLLCFD FTRERFGPPL PLPFHSYNAD FFVSLACVRE EQLAVLYQRW GAFETIEICV TNKIDPNTVS WSKFLITSTG
301: FPVDTFSGSF FIDEEKKVAV VFDLDRYKPT ETCRYQIVYI IGQDEYFKSV NMGVAPNIAK NSYQAYCVPL VCSSSYVPSL VQLQINKPGK RKESN

Arabidopsis Description

F-box/kelch-repeat protein At3g13680 [Source:UniProtKB/Swiss-Prot;Acc:Q9LID1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.