Factsheet for Bra031212.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY13795	Canola	cytosol	98.46	97.7
Bra030282.1-P	Field mustard	cytosol	36.76	44.27
AT1G19470.1	Thale cress	cytosol	45.76	43.2
AT1G19460.1	Thale cress	cytosol	45.24	42.31
Bra030283.1-P	Field mustard	cytosol	27.76	37.76
KRG89620	Soybean	cytosol	12.6	36.57
Bra025310.1-P	Field mustard	cytosol, plastid	34.96	36.46
Bra030269.1-P	Field mustard	cytosol	34.45	36.31
Bra033610.1-P	Field mustard	plastid	34.96	36.17
VIT_07s0031g01580.t01	Wine grape	plastid	33.16	35.73
KRH64149	Soybean	cytosol	30.33	32.87
KRH53797	Soybean	cytosol	30.08	32.32
Solyc04g051870.1.1	Tomato	extracellular	29.05	31.65
PGSC0003DMT400042717	Potato	cytosol	29.05	31.65
Bra033606.1-P	Field mustard	cytosol	32.65	31.59
TraesCS2A01G111200.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	25.45	26.26
TraesCS2B01G130200.1	Wheat	cytosol, endoplasmic reticulum, plastid	25.19	25.99
GSMUA_Achr2P14860_001	Banana	cytosol, endoplasmic reticulum, plastid	24.42	25.47
EER97716	Sorghum	plastid	23.14	23.81
Zm00001d007152_P001	Maize	plastid	22.62	23.4
Os07t0673700-01	Rice	cytosol	22.36	22.96
HORVU2Hr1G019280.1	Barley	cytosol	21.08	21.64
TraesCS2D01G111900.1	Wheat	nucleus	20.82	17.8

Protein Annotations

Gene3D:2.120.10.80	MapMan:35.1	EnsemblPlantsGene:Bra031212	EnsemblPlants:Bra031212.1	EnsemblPlants:Bra031212.1-P	InterPro:F-box-like_dom_sf
InterPro:F-box_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001810	InterPro:IPR015915
InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	UniProt:M4EQY9	PFAM:PF00646	PFAM:PF01344	PFscan:PS50181
PANTHER:PTHR24414	PANTHER:PTHR24414:SF23	SMART:SM00256	SMART:SM00612	SUPFAM:SSF117281	SUPFAM:SSF81383
UniParc:UPI0002542F6B	:	:	:	:	:

Description

AT1G19470 (E=1e-083) | kelch repeat-containing F-box family protein

Coordinates

chrA09:-:31984885..31986054

Molecular Weight (calculated)

43416.5 Da

IEP (calculated)

6.596

GRAVY (calculated)

-0.012

Length

389 amino acids

Sequence
(BLAST)

001: MAVISDIPDG DNGGAPNKKP QEQPEEVTSL ESLPDVLIEH IIARVPRSNH PEISLTSKLF RRIIASRGLR LTRSLLAISE HVLYALIAFP PHPLSWHILY
101: RSNTASLRLR RVTTLPPMPY GPAVVTVGHD IYVIGGYGGT RYLSSVTVVD CRTHTCRSLP SMRVPRYRAA AGVIDGKIYV MGGCENRISK DWVEAFDLER
201: QIWLGTGGEV SDESGGFVTY DVVKDKIYAL GLRQSLHVCE PKEGGVIIIW EGDASELRGL WQGSSCVVDD LLYTIDPMCW RGHPIIVFDP EEGVEGVWKP
301: VKGVYGLPPC FPWFAYESKM ANVGGKLVIL IGNQSWLWNY YGYKYIWCVE IALERRQGGE IWGRVESVDV VFKTAESSPI IELCRTVIV

Best Arabidopsis Sequence Match ( AT1G19470.1 )
(BLAST)

001: MVNISEIPDD SNDGCDPNKK PEEQVLRRSR RIATRNENQN KKPKEEEEED NRSVSFPIPN ELTEACVALI RKCDYPSLSS VSSYFFNLIA SSGLYETRSR
101: LGLSETFLYA AIKFPDTNPA NWYILHRNKV SSLRLTEVGS LPPVPWGCSV VTVGQEMYVI GGLLDIRRLQ LMTLIDCRTH KCRSLPSMKR GRYKAAAGVV
201: DGKIYVIGGF RMRKPDAEWI EVFDLKTQIW ESLPGPYPRT SAGSQFSAHA VMEDKLYMLG SKFCLVYEPK RNGEWDASVG ATPLKDLWDK TCCVVDDMLY
301: TTDPRRTLGH PIVVYHPKDK TWRPVKGESL WSLPSYFFSK SEMANFGGKL VILGSNKSYV TGDCIGEKGI WCVMIELEKR EGGEIWGKVE SLDCVLGDIN
401: FLSVRLCQTL TI

Arabidopsis Description

Kelch repeat-containing protein At1g19470 [Source:UniProtKB/Swiss-Prot;Acc:P0C2F7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.