Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G19470.1 | Thale cress | cytosol | 84.13 | 84.95 |
| AT2G29810.1 | Thale cress | cytosol | 43.75 | 47.52 |
| CDY59764 | Canola | cytosol | 42.31 | 45.36 |
| Bra031212.1-P | Field mustard | cytosol | 42.31 | 45.24 |
| AT2G29770.1 | Thale cress | cytosol | 41.83 | 44.96 |
| CDY13795 | Canola | cytosol | 42.07 | 44.64 |
| CDY13796 | Canola | cytosol | 40.62 | 44.24 |
| AT2G29860.1 | Thale cress | cytosol | 24.28 | 42.08 |
| AT2G29830.1 | Thale cress | cytosol | 37.74 | 40.99 |
| AT2G29780.1 | Thale cress | cytosol | 39.18 | 40.95 |
| AT2G29820.1 | Thale cress | cytosol | 36.78 | 39.43 |
| AT2G29800.1 | Thale cress | cytosol | 39.18 | 39.37 |
| CDY15078 | Canola | extracellular | 26.44 | 38.87 |
| AT2G29600.1 | Thale cress | nucleus | 38.22 | 38.31 |
| AT2G21680.1 | Thale cress | cytosol | 39.42 | 38.23 |
| AT4G39240.1 | Thale cress | cytosol, nucleus, peroxisome | 31.73 | 35.2 |
| AT3G27910.1 | Thale cress | extracellular, golgi | 24.04 | 34.01 |
| AT2G21950.1 | Thale cress | cytosol | 30.29 | 33.87 |
| KRG89620 | Soybean | cytosol | 10.82 | 33.58 |
| AT4G14905.2 | Thale cress | plastid | 28.85 | 32.26 |
| PGSC0003DMT400042717 | Potato | cytosol | 26.2 | 30.53 |
| Solyc04g051870.1.1 | Tomato | extracellular | 25.72 | 29.97 |
| KRH64149 | Soybean | cytosol | 25.48 | 29.53 |
| KRH53797 | Soybean | cytosol | 24.76 | 28.45 |
| VIT_07s0031g01580.t01 | Wine grape | plastid | 24.28 | 27.98 |
| TraesCS2B01G130200.1 | Wheat | cytosol, endoplasmic reticulum, plastid | 21.63 | 23.87 |
| EER97716 | Sorghum | plastid | 21.39 | 23.55 |
| Os07t0673700-01 | Rice | cytosol | 21.39 | 23.48 |
| Zm00001d007152_P001 | Maize | plastid | 21.15 | 23.4 |
| TraesCS2A01G111200.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 21.15 | 23.34 |
| GSMUA_Achr2P14860_001 | Banana | cytosol, endoplasmic reticulum, plastid | 20.91 | 23.32 |
| HORVU2Hr1G019280.1 | Barley | cytosol | 18.03 | 19.79 |
| TraesCS2D01G111900.1 | Wheat | nucleus | 17.79 | 16.26 |
Protein Annotations
| Gene3D:2.120.10.80 | MapMan:35.1 | EntrezGene:838530 | ProteinID:AAF79430.1 | ProteinID:AEE29854.1 | ArrayExpress:AT1G19460 |
| EnsemblPlantsGene:AT1G19460 | RefSeq:AT1G19460 | TAIR:AT1G19460 | RefSeq:AT1G19460-TAIR-G | EnsemblPlants:AT1G19460.1 | TAIR:AT1G19460.1 |
| Unigene:At.51680 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller |
| InterPro:Kelch_1 | RefSeq:NP_173378.1 | PFAM:PF01344 | PANTHER:PTHR24414 | PANTHER:PTHR24414:SF23 | UniProt:Q3ED93 |
| SMART:SM00612 | SUPFAM:SSF117281 | UniParc:UPI0000162E10 | SEG:seg | : | : |
Description
Kelch repeat-containing protein At1g19460 [Source:UniProtKB/Swiss-Prot;Acc:Q3ED93]
Coordinates
chr1:+:6738484..6739734
Molecular Weight (calculated)
47187.8 Da
IEP (calculated)
7.240
GRAVY (calculated)
-0.332
Length
416 amino acids
Sequence
(BLAST)
(BLAST)
001: MANISEISGD SNDGGDPNKK PEEQVLRRSR RIATRNENQN KKPKEEEEKD NRSVSFPIPN ELTEACVALI RKCDYPSLSS VSSYFFNLIA SSELYETRSR
101: LGLSETFLYA AIRFPDTNPP NWYILHRNKV SSLRLSKLES LPPVPYGCSV VTIGQEMYVI GGLLDVRRLQ LMTLIDCRTH KCRSLPKMKR GRYHAAAGVF
201: DGKIYVIGGF RMRKPDAEWI EVFDLKKQIW ESLPGPYPKT SMDSQFFAHA VMEDKLYILG SRCLIYEPKR NGEWDATVNA NPIWNLWKVP CTMQCVIDDM
301: LYTIDPQCTL GHPIVVYNPK DKTWRPVKGE SLRTLPSYFV SDGSEMANFG GKLVILGSNG SCYDTGDCIG EKGIWCVMIE LEKREGGEIW GKVESLDCVL
401: GDINFLSVWL CQTLTL
101: LGLSETFLYA AIRFPDTNPP NWYILHRNKV SSLRLSKLES LPPVPYGCSV VTIGQEMYVI GGLLDVRRLQ LMTLIDCRTH KCRSLPKMKR GRYHAAAGVF
201: DGKIYVIGGF RMRKPDAEWI EVFDLKKQIW ESLPGPYPKT SMDSQFFAHA VMEDKLYILG SRCLIYEPKR NGEWDATVNA NPIWNLWKVP CTMQCVIDDM
301: LYTIDPQCTL GHPIVVYNPK DKTWRPVKGE SLRTLPSYFV SDGSEMANFG GKLVILGSNG SCYDTGDCIG EKGIWCVMIE LEKREGGEIW GKVESLDCVL
401: GDINFLSVWL CQTLTL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.