Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT2G29600.1 | Thale cress | nucleus | 62.8 | 62.65 |
| AT2G29810.1 | Thale cress | cytosol | 49.03 | 53.0 |
| AT2G29860.1 | Thale cress | cytosol | 28.02 | 48.33 |
| AT2G29780.1 | Thale cress | cytosol | 46.38 | 48.24 |
| AT2G29770.1 | Thale cress | cytosol | 43.72 | 46.77 |
| AT2G29830.1 | Thale cress | cytosol | 41.3 | 44.65 |
| AT2G29820.1 | Thale cress | cytosol | 40.82 | 43.56 |
| CDY15873 | Canola | cytosol | 16.91 | 42.94 |
| Bra030282.1-P | Field mustard | cytosol | 32.37 | 41.49 |
| CDX99573 | Canola | cytosol | 32.13 | 41.3 |
| AT1G19470.1 | Thale cress | cytosol | 40.1 | 40.29 |
| CDX99574 | Canola | cytosol | 32.37 | 39.41 |
| AT1G19460.1 | Thale cress | cytosol | 39.37 | 39.18 |
| CDY15875 | Canola | cytosol | 26.33 | 35.97 |
| AT2G21680.1 | Thale cress | cytosol | 36.47 | 35.2 |
| AT3G27910.1 | Thale cress | extracellular, golgi | 24.15 | 34.01 |
| Bra030283.1-P | Field mustard | cytosol | 23.19 | 33.57 |
| AT4G39240.1 | Thale cress | cytosol, nucleus, peroxisome | 28.02 | 30.93 |
| AT2G21950.1 | Thale cress | cytosol | 27.05 | 30.11 |
| AT4G14905.2 | Thale cress | plastid | 27.05 | 30.11 |
| KRH64149 | Soybean | cytosol | 24.64 | 28.41 |
| KRG89620 | Soybean | cytosol | 8.94 | 27.61 |
| KRH53797 | Soybean | cytosol | 23.67 | 27.07 |
| VIT_07s0031g01580.t01 | Wine grape | plastid | 22.71 | 26.04 |
| PGSC0003DMT400042717 | Potato | cytosol | 21.74 | 25.21 |
| Solyc04g051870.1.1 | Tomato | extracellular | 21.5 | 24.93 |
| GSMUA_Achr2P14860_001 | Banana | cytosol, endoplasmic reticulum, plastid | 21.01 | 23.32 |
| TraesCS2B01G130200.1 | Wheat | cytosol, endoplasmic reticulum, plastid | 19.81 | 21.75 |
| TraesCS2A01G111200.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 19.57 | 21.49 |
| EER97716 | Sorghum | plastid | 18.36 | 20.11 |
| Zm00001d007152_P001 | Maize | plastid | 18.12 | 19.95 |
| Os07t0673700-01 | Rice | cytosol | 17.63 | 19.26 |
| HORVU2Hr1G019280.1 | Barley | cytosol | 15.94 | 17.41 |
| TraesCS2D01G111900.1 | Wheat | nucleus | 16.67 | 15.16 |
Protein Annotations
| Gene3D:2.120.10.80 | MapMan:35.1 | EntrezGene:817530 | ProteinID:AAC35221.1 | ProteinID:AEC08306.1 | ArrayExpress:AT2G29800 |
| EnsemblPlantsGene:AT2G29800 | RefSeq:AT2G29800 | TAIR:AT2G29800 | RefSeq:AT2G29800-TAIR-G | EnsemblPlants:AT2G29800.1 | TAIR:AT2G29800.1 |
| Unigene:At.66273 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller |
| InterPro:Kelch_1 | RefSeq:NP_180541.1 | UniProt:O82376 | PFAM:PF01344 | PANTHER:PTHR24414 | PANTHER:PTHR24414:SF23 |
| SMART:SM00612 | SUPFAM:SSF117281 | UniParc:UPI00000A653C | SEG:seg | : | : |
Description
Putative F-box/kelch-repeat protein At2g29800 [Source:UniProtKB/Swiss-Prot;Acc:O82376]
Coordinates
chr2:-:12722939..12724602
Molecular Weight (calculated)
47690.6 Da
IEP (calculated)
5.518
GRAVY (calculated)
-0.343
Length
414 amino acids
Sequence
(BLAST)
(BLAST)
001: MASISETSDD GSNGGVPNQK PEEPHKNPQE EKENQNENPN EADEEDDHQD EEVENVPPIP RKIPPVLIEN TIAPLRRCHY PKLSLLSNAF RQVISSEDLF
101: QVRSLIGSTE PVLYTLITFK YPTFEEGRWF ILQRRNNTSL KLNCVTSLPP MFLGCTAVTI GHKIYVVGGY NFRYNKTIST VLEIDCRFNT CRHLRNMKRD
201: RCSAVAGVID GRIYVVAGRQ RRFDDWVEVF DVETERWELV PGPFSSFASS SGKFIVHVVL DNKIYIMDGD YCFAYDPRRR RWETWGPESA QRSYWHLSSC
301: VVDDLLYAIV PREIFGASIV VYDPRGIAWR PVMGLEFWPN LVYFESKMAN FGGKLVILGC YRSSFDYYRK DVWCVEVALE KHEDGQIWGK VESLSLVNAF
401: PMSPFFELSR TVTI
101: QVRSLIGSTE PVLYTLITFK YPTFEEGRWF ILQRRNNTSL KLNCVTSLPP MFLGCTAVTI GHKIYVVGGY NFRYNKTIST VLEIDCRFNT CRHLRNMKRD
201: RCSAVAGVID GRIYVVAGRQ RRFDDWVEVF DVETERWELV PGPFSSFASS SGKFIVHVVL DNKIYIMDGD YCFAYDPRRR RWETWGPESA QRSYWHLSSC
301: VVDDLLYAIV PREIFGASIV VYDPRGIAWR PVMGLEFWPN LVYFESKMAN FGGKLVILGC YRSSFDYYRK DVWCVEVALE KHEDGQIWGK VESLSLVNAF
401: PMSPFFELSR TVTI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.