Factsheet for Bra030282.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY15873	Canola	cytosol	46.13	91.41
Bra030283.1-P	Field mustard	cytosol	39.63	44.76
AT2G29810.1	Thale cress	cytosol	49.85	42.04
AT2G29830.1	Thale cress	cytosol	44.58	37.6
Bra031212.1-P	Field mustard	cytosol	44.27	36.76
KRG89620	Soybean	cytosol	14.55	35.07
AT2G29770.1	Thale cress	cytosol	41.18	34.37
AT2G29780.1	Thale cress	cytosol	41.8	33.92
AT2G29860.1	Thale cress	cytosol	24.77	33.33
AT2G29820.1	Thale cress	cytosol	39.63	32.99
AT2G29800.1	Thale cress	cytosol	41.49	32.37
Bra025310.1-P	Field mustard	cytosol, plastid	36.53	31.64
AT2G29600.1	Thale cress	nucleus	40.25	31.33
Bra033610.1-P	Field mustard	plastid	34.06	29.26
Bra030269.1-P	Field mustard	cytosol	31.89	27.91
KRH64149	Soybean	cytosol	30.65	27.58
KRH53797	Soybean	cytosol	30.34	27.07
VIT_07s0031g01580.t01	Wine grape	plastid	28.48	25.48
PGSC0003DMT400042717	Potato	cytosol	27.86	25.21
Solyc04g051870.1.1	Tomato	extracellular	27.55	24.93
Bra033606.1-P	Field mustard	cytosol	30.34	24.38
TraesCS2B01G130200.1	Wheat	cytosol, endoplasmic reticulum, plastid	26.01	22.28
GSMUA_Achr2P14860_001	Banana	cytosol, endoplasmic reticulum, plastid	25.7	22.25
Zm00001d007152_P001	Maize	plastid	25.7	22.07
TraesCS2A01G111200.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	25.7	22.02
EER97716	Sorghum	plastid	24.77	21.16
HORVU2Hr1G019280.1	Barley	cytosol	24.77	21.11
Os07t0673700-01	Rice	cytosol	23.53	20.05
TraesCS2D01G111900.1	Wheat	nucleus	22.91	16.26

Protein Annotations

EnsemblPlants:Bra030282.1	EnsemblPlants:Bra030282.1-P	EnsemblPlantsGene:Bra030282	Gene3D:2.120.10.80	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	PANTHER:PTHR24414	PANTHER:PTHR24414:SF23
PFAM:PF01344	SMART:SM00612	SUPFAM:SSF117281	UniParc:UPI0002543E1E	UniProt:M4ENB2	MapMan:35.1

Description

AT2G29810 (E=7e-073) | kelch repeat-containing F-box family protein

Coordinates

chrA04:+:9376271..9377242

Molecular Weight (calculated)

35868.0 Da

IEP (calculated)

6.778

GRAVY (calculated)

-0.203

Length

323 amino acids

Sequence
(BLAST)

001: MAQIPGGGDA NKKPQEEPVL YASIGFPPSE SPSWYTLHRD NVSLTLRKIQ EPLPSRLLSA VVTIGTEMYV LGGSVGGNAT SDVTLIDCRL RTSQPLPSMR
101: RARRHAVAGA IDGKIYVIGG CRKKSYDWVE VLDVKTRSWR AVPGVLPHAH WEGQFVTCAV MDDKIFVLDP SATCLVFDPS VGALVEWDDG VEMRSLWQAS
201: SCVVDDMLYT VDPGCSLKHP IVVYDPKAED RRWRPVYGVD LKKDLPPFDS WYDSKMANHG GKLVVLLGSN PWPCFHHGRQ DVWCVEIALE RQGDDISGHV
301: ESTTLVLKSR KWPSIELSRS VTL

Best Arabidopsis Sequence Match ( AT2G29810.1 )
(BLAST)

001: MAVISETSDE GSNGGAANKK PQEEEENIPP IPKELPEELI VIIVALVRRY HYPKLSLISK AYRDLISSPE LFQTRSRLGF TEPVLYTSIG FPPFDLPSWY
101: ILHRISLQFK QITSLPSMLP GSAVVTIDYK MYVLGGFIGL NQPVSTMIVI DCRFHTYREL PSMQRDRGGA AAGVIDGKIY VIGGCKKRYN DWVEVFDVEN
201: ESWETVPGPY PNVASESVEF SQYAVMEQKI YILDPLFCLT YEPRKRRFEA WGRRSQQRRY ESCCVVNDML CTVDSTCSHG YPIVVYDPKG MVWRPVKGVQ
301: SSDLPNLVYY ESRMANFGGK LVILGGNQSR DRKDSYLEKD IWCIEIALEK REDGDIWGHV ESRSVVLSSS KWPLIALSRS VTV

Arabidopsis Description

Putative F-box/kelch-repeat protein At2g29810 [Source:UniProtKB/Swiss-Prot;Acc:O82375]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.